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  5. LOC_Os02g35950.1

LOC_Os02g35950.1 (ATRBP47C', RBP47C',...)


Aliases : ATRBP47C', RBP47C', LOC_Os02g35950

Description : mRNA-binding regulatory factor (RBP45/47)


Gene families : OG0000531 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000531_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g35950.1
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
Cba_g73180 No alias regulatory factor *(RBP45/47) of mRNA stress granule... 0.01 OrthoFinder output from all 47 species
MA_10430323g0010 No alias mRNA-binding regulatory factor (RBP45/47) 0.02 OrthoFinder output from all 47 species
Msp_g10876 ATRBP47B, RBP47B regulatory factor *(RBP45/47) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Solyc03g031720.3.1 ATRBP45C, Solyc03g031720 mRNA-binding regulatory factor (RBP45/47) 0.04 OrthoFinder output from all 47 species
Solyc10g050860.3.1 ATRBP47B,... mRNA-binding regulatory factor (RBP45/47) 0.04 OrthoFinder output from all 47 species
Zm00001e012505_P001 ATRBP45A,... mRNA-binding regulatory factor (RBP45/47) 0.06 OrthoFinder output from all 47 species
Zm00001e022780_P001 ATRBP47C',... mRNA-binding regulatory factor (RBP45/47) 0.07 OrthoFinder output from all 47 species
Zm00001e040981_P001 ATRBP47C',... mRNA-binding regulatory factor (RBP45/47) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 4 58
IPR000504 RRM_dom 186 249
IPR000504 RRM_dom 85 155
No external refs found!