LOC_Os01g73230.1

Description : SYP6 group Qc-type SNARE protein

Gene families : OG_01_0004176 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004176_tree ,
OG_02_0004321 (LandPlants) Phylogenetic Tree(s): OG_02_0004321_tree ,
OG_03_0005857 (SeedPlants) Phylogenetic Tree(s): OG_03_0005857_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g73230.1
Cluster	HCCA: Cluster_97

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00074210	evm_27.TU.AmTr_v1...	Vesicle trafficking.SNARE target membrane recognition...	0.03	Archaeplastida
Cre06.g290100	No alias	Vesicle trafficking.SNARE target membrane recognition...	0.03	Archaeplastida
GSVIVT01038187001	No alias	Vesicle trafficking.SNARE target membrane recognition...	0.03	Archaeplastida
Gb_30438	No alias	SYP6 group Qc-type SNARE protein	0.04	Archaeplastida
Solyc12g089150.2.1	No alias	SYP6 group Qc-type SNARE protein	0.04	Archaeplastida
AMTR_s00007p00074210	evm_27.TU.AmTr_v1...	Vesicle trafficking.SNARE target membrane recognition...	0.03	LandPlants
GSVIVT01038187001	No alias	Vesicle trafficking.SNARE target membrane recognition...	0.03	LandPlants
Gb_30438	No alias	SYP6 group Qc-type SNARE protein	0.04	LandPlants
Solyc12g089150.2.1	No alias	SYP6 group Qc-type SNARE protein	0.02	LandPlants
AMTR_s00007p00074210	evm_27.TU.AmTr_v1...	Vesicle trafficking.SNARE target membrane recognition...	0.01	SeedPlants
GSVIVT01038187001	No alias	Vesicle trafficking.SNARE target membrane recognition...	0.03	SeedPlants
Gb_30438	No alias	SYP6 group Qc-type SNARE protein	0.04	SeedPlants
Solyc12g089150.2.1	No alias	SYP6 group Qc-type SNARE protein	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0048193	Golgi vesicle transport	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR015260	Syntaxin-6_N	6	98
IPR000727	T_SNARE_dom	179	230

External Links

No external refs found!