LOC_Os01g73230.1


Description : SYP6 group Qc-type SNARE protein


Gene families : OG_01_0004176 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004176_tree ,
OG_02_0004321 (LandPlants) Phylogenetic Tree(s): OG_02_0004321_tree ,
OG_03_0005857 (SeedPlants) Phylogenetic Tree(s): OG_03_0005857_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g73230.1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00074210 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.03 Archaeplastida
Cre06.g290100 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 Archaeplastida
GSVIVT01038187001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 Archaeplastida
Gb_30438 No alias SYP6 group Qc-type SNARE protein 0.04 Archaeplastida
Solyc12g089150.2.1 No alias SYP6 group Qc-type SNARE protein 0.04 Archaeplastida
AMTR_s00007p00074210 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.03 LandPlants
GSVIVT01038187001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 LandPlants
Gb_30438 No alias SYP6 group Qc-type SNARE protein 0.04 LandPlants
Solyc12g089150.2.1 No alias SYP6 group Qc-type SNARE protein 0.02 LandPlants
AMTR_s00007p00074210 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.01 SeedPlants
GSVIVT01038187001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 SeedPlants
Gb_30438 No alias SYP6 group Qc-type SNARE protein 0.04 SeedPlants
Solyc12g089150.2.1 No alias SYP6 group Qc-type SNARE protein 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0048193 Golgi vesicle transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR015260 Syntaxin-6_N 6 98
IPR000727 T_SNARE_dom 179 230
No external refs found!