Aliases : LOC_Os02g33720
Description : RING-H2 finger protein ATL72 OS=Arabidopsis thaliana (sp|q9sg96|atl72_arath : 95.1)
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00008p00185200 | ATL6,... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00009p00172890 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00025p00229930 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
AT1G22500 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT1G72200 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT1G76410 | ATL8 | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT2G35000 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT2G44578 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT2G46160 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT3G10910 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G14320 | No alias | Zinc finger, C3HC4 type (RING finger) family protein | 0.02 | OrthoFinder output from all 47 species | |
AT3G18773 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT3G61550 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT4G09110 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT5G01880 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT5G05280 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g049763 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g051114 | No alias | E3 ubiquitin ligase *(BRH) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g07783 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g15196 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g05267 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g21169 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g20209 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.04G045600.1 | Ceric.04G045600 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.09G091200.1 | Ceric.09G091200 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.26G043300.1 | Ceric.26G043300 | not classified & original description: pacid=50598941... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g15134 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g23227 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g23802 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g02548 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01009096001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01012015001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01012022001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01028038001 | ATL2, TL2 | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01032684001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Gb_14778 | No alias | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g28080.1 | ATL3, LOC_Os03g28080 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
MA_10434759g0010 | BRH1 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
MA_124750g0010 | No alias | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
MA_214717g0010 | RHA3B | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
MA_223841g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
MA_25345g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
MA_31462g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
MA_6931619g0010 | No alias | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
MA_78702g0010 | ATL8 | RING-H2 finger protein ATL74 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
MA_9764263g0010 | No alias | RING-H2 finger protein ATL67 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g18327 | ATL4H | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g30102 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g46434 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g04206 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g37451 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g100100.4.1 | Solyc01g100100 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g068415.1.1 | RHA3A, Solyc02g068415 | RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
Solyc02g082420.3.1 | Solyc02g082420 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g114090.1.1 | Solyc03g114090 | RING-H2-class E3 ligase | 0.06 | OrthoFinder output from all 47 species | |
Spa_g01499 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g08710 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g29391 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g11104 | No alias | RING-H2-class ATL-subclass E3 ubiquiTin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e007956_P001 | ATRING1, RING1,... | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e016092_P001 | Zm00001e016092 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e019779_P001 | Zm00001e019779 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e023260_P001 | Zm00001e023260 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e023515_P001 | Zm00001e023515 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e031439_P001 | Zm00001e031439 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | HCCA |
MF | GO:0005384 | manganese ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0006873 | cellular monoatomic ion homeostasis | IEP | HCCA |
BP | GO:0006875 | cellular metal ion homeostasis | IEP | HCCA |
MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
BP | GO:0019725 | cellular homeostasis | IEP | HCCA |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
BP | GO:0030003 | cellular monoatomic cation homeostasis | IEP | HCCA |
BP | GO:0030026 | cellular manganese ion homeostasis | IEP | HCCA |
BP | GO:0042592 | homeostatic process | IEP | HCCA |
BP | GO:0043631 | RNA polyadenylation | IEP | HCCA |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0046916 | cellular transition metal ion homeostasis | IEP | HCCA |
BP | GO:0048878 | chemical homeostasis | IEP | HCCA |
BP | GO:0050801 | monoatomic ion homeostasis | IEP | HCCA |
BP | GO:0055065 | metal ion homeostasis | IEP | HCCA |
BP | GO:0055071 | manganese ion homeostasis | IEP | HCCA |
BP | GO:0055076 | transition metal ion homeostasis | IEP | HCCA |
BP | GO:0055080 | monoatomic cation homeostasis | IEP | HCCA |
BP | GO:0055082 | cellular chemical homeostasis | IEP | HCCA |
MF | GO:0070566 | adenylyltransferase activity | IEP | HCCA |
BP | GO:0098771 | inorganic ion homeostasis | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 132 | 175 |
No external refs found! |