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Aliases : emb2746, LOC_Os02g33610
Description : exo-/endoribonuclease (RNase J)
Gene families : OG0003970 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003970_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00241540 | emb2746,... | RNA processing.organelle machineries.ribonuclease... | 0.04 | OrthoFinder output from all 47 species | |
| AT5G63420 | emb2746 | RNA-metabolising metallo-beta-lactamase family protein | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g32457 | emb2746 | exoribonuclease *(RNase J) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g22857 | emb2746 | exoribonuclease *(RNase J) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0392.g067768 | emb2746 | exoribonuclease *(RNase J) & original description: CDS=108-2618 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g24290 | emb2746 | exoribonuclease *(RNase J) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.02G090000.1 | emb2746, Ceric.02G090000 | exoribonuclease *(RNase J) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g22106 | emb2746 | exoribonuclease *(RNase J) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g02934 | emb2746 | exoribonuclease *(RNase J) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01008515001 | emb2746 | Vesicle trafficking.target membrane tethering.DSL1... | 0.09 | OrthoFinder output from all 47 species | |
| Gb_26634 | emb2746 | exo-/endoribonuclease (RNase J) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_29169 | emb2746 | exo-/endoribonuclease (RNase J) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10429859g0010 | emb2746 | exo-/endoribonuclease (RNase J) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10430099g0010 | emb2746 | no description available(sp|q84w56|rnj_arath : 150.0) | 0.04 | OrthoFinder output from all 47 species | |
| Mp3g10830.1 | emb2746 | exo-/endoribonuclease (RNase J) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g15010 | emb2746 | exoribonuclease *(RNase J) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g25599 | emb2746 | exoribonuclease *(RNase J) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g40893 | emb2746 | exoribonuclease *(RNase J) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g25090 | emb2746 | exoribonuclease *(RNase J) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16311 | No alias | exoribonuclease *(RNase J) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g111260.3.1 | emb2746, Solyc03g111260 | exo-/endoribonuclease (RNase J) | 0.11 | OrthoFinder output from all 47 species | |
| Spa_g18551 | emb2746 | exoribonuclease *(RNase J) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e013900_P001 | emb2746, Zm00001e013900 | exo-/endoribonuclease (RNase J) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e025070_P003 | emb2746, Zm00001e025070 | exo-/endoribonuclease (RNase J) | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | HCCA |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | HCCA |
| BP | GO:0006298 | mismatch repair | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | HCCA |
| CC | GO:0009507 | chloroplast | IEP | HCCA |
| CC | GO:0009536 | plastid | IEP | HCCA |
| BP | GO:0016311 | dephosphorylation | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| No external refs found! |