LOC_Os02g33330.1 (LOC_Os02g33330)


Aliases : LOC_Os02g33330

Description : no hits & (original description: none)


Gene families : OG0001529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001529_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g33330.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT1G79160 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 OrthoFinder output from all 47 species
Aev_g06026 No alias regulatory protein *(CFL) of cutin and suberin... 0.02 OrthoFinder output from all 47 species
Aspi01Gene21195.t1 Aspi01Gene21195 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21196.t1 Aspi01Gene21196 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26960.t1 Aspi01Gene26960 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g25511 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g76264 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01073 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20643 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25752 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g31586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011000 No alias not classified & original description: CDS=157-1332 0.02 OrthoFinder output from all 47 species
Solyc07g066570.4.1 Solyc07g066570 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
MF GO:0033897 ribonuclease T2 activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA

No InterPro domains available for this sequence

No external refs found!