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LOC_Os02g32620.1 (LOC_Os02g32620)


Aliases : LOC_Os02g32620

Description : PAN domain-containing protein At5g03700 OS=Arabidopsis thaliana (sp|q9lzr8|y5370_arath : 319.0)


Gene families : OG0010647 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010647_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g32620.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00203990 evm_27.TU.AmTr_v1... PAN domain-containing protein At5g03700 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT5G03700 No alias D-mannose binding lectin protein with Apple-like... 0.05 OrthoFinder output from all 47 species
Aev_g04101 SD2-5 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Aob_g14612 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Dac_g38518 SD2-5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033786001 No alias PAN domain-containing protein At5g03700 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Solyc09g009150.1.1 Solyc09g009150 PAN domain-containing protein At5g03700 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e014708_P001 Zm00001e014708 PAN domain-containing protein At5g03700 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e024119_P001 Zm00001e024119 PAN domain-containing protein At5g03700 OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0048544 recognition of pollen IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001480 Bulb-type_lectin_dom 101 183
IPR000858 S_locus_glycoprot_dom 274 333
No external refs found!