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  5. LOC_Os02g28590.1

LOC_Os02g28590.1 (LOC_Os02g28590)


Aliases : LOC_Os02g28590

Description : no hits & (original description: none)


Gene families : OG0001367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001367_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g28590.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00207230 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00055p00185500 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00085p00174790 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT4G04480 No alias unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:... 0.05 OrthoFinder output from all 47 species
AT4G22030 No alias F-box family protein with a domain of unknown function (DUF295) 0.03 OrthoFinder output from all 47 species
Aspi01Gene34497.t1 Aspi01Gene34497 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0182.g056424 No alias not classified & original description: CDS=1-1896 0.03 OrthoFinder output from all 47 species
Cba_g13201 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z099600.1 Ceric.1Z099600 not classified & original description: pacid=50573463... 0.03 OrthoFinder output from all 47 species
Ceric.1Z099700.1 Ceric.1Z099700 not classified & original description: pacid=50573460... 0.02 OrthoFinder output from all 47 species
Ceric.1Z099800.1 Ceric.1Z099800 not classified & original description: pacid=50573466... 0.03 OrthoFinder output from all 47 species
Ceric.1Z159800.1 Ceric.1Z159800 not classified & original description: pacid=50567680... 0.02 OrthoFinder output from all 47 species
Ceric.1Z159900.1 Ceric.1Z159900 not classified & original description: pacid=50567683... 0.02 OrthoFinder output from all 47 species
Ceric.1Z166900.1 Ceric.1Z166900 not classified & original description: pacid=50632887... 0.03 OrthoFinder output from all 47 species
Ceric.1Z228600.1 Ceric.1Z228600 not classified & original description: pacid=50606299... 0.02 OrthoFinder output from all 47 species
Ceric.33G013700.1 Ceric.33G013700 not classified & original description: pacid=50607125... 0.03 OrthoFinder output from all 47 species
Dac_g26357 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g45269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17787 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g13260.1 LOC_Os02g13260 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Pir_g17788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24381 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g18978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g080840.1.1 Solyc02g080840 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc02g080850.1.1 Solyc02g080850 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR027949 Chloroplast_duf 3 65
IPR027949 Chloroplast_duf 75 107
No external refs found!