LOC_Os02g27480.1 (LOC_Os02g27480)


Aliases : LOC_Os02g27480

Description : MACPF domain-containing protein At1g14780 OS=Arabidopsis thaliana (sp|q8l612|macp1_arath : 465.0)


Gene families : OG0000861 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000861_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g27480.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00141350 evm_27.TU.AmTr_v1... MACPF domain-containing protein At1g14780 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00162p00048220 CAD1,... MACPF domain-containing protein CAD1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00176p00035220 evm_27.TU.AmTr_v1... MACPF domain-containing protein At1g14780 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G14780 No alias MAC/Perforin domain-containing protein 0.02 OrthoFinder output from all 47 species
AT1G28380 NSL1 MAC/Perforin domain-containing protein 0.04 OrthoFinder output from all 47 species
AT1G29690 CAD1 MAC/Perforin domain-containing protein 0.04 OrthoFinder output from all 47 species
Adi_g055197 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.02 OrthoFinder output from all 47 species
Aop_g00734 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.03 OrthoFinder output from all 47 species
Aop_g04516 CAD1 regulatory protein *(CAD1) of Programmed Cell Death &... 0.04 OrthoFinder output from all 47 species
Aop_g10252 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.02 OrthoFinder output from all 47 species
Aop_g26292 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.01 OrthoFinder output from all 47 species
Azfi_s0090.g042786 CAD1 regulatory protein *(CAD1) of Programmed Cell Death &... 0.02 OrthoFinder output from all 47 species
Cba_g37681 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.03 OrthoFinder output from all 47 species
Ceric.11G074000.1 Ceric.11G074000 not classified & original description: pacid=50595318... 0.03 OrthoFinder output from all 47 species
Ceric.34G058000.1 Ceric.34G058000 not classified & original description: pacid=50624022... 0.03 OrthoFinder output from all 47 species
Dac_g12035 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.03 OrthoFinder output from all 47 species
Dde_g02317 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.02 OrthoFinder output from all 47 species
Ehy_g06909 CAD1 regulatory protein *(CAD1) of Programmed Cell Death &... 0.03 OrthoFinder output from all 47 species
Ehy_g09173 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.02 OrthoFinder output from all 47 species
GSVIVT01011635001 No alias MACPF domain-containing protein At1g14780 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01021099001 NSL1 MACPF domain-containing protein NSL1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01022410001 No alias MACPF domain-containing protein At4g24290 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01023238001 No alias MACPF domain-containing protein At4g24290 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01031622001 No alias MACPF domain-containing protein At4g24290 OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
Gb_07458 No alias MACPF domain-containing protein At1g14780 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_16359 CAD1 MACPF domain-containing protein CAD1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g08476 CAD1 regulatory protein *(CAD1) of Programmed Cell Death &... 0.02 OrthoFinder output from all 47 species
MA_10436626g0030 No alias MACPF domain-containing protein At4g24290 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10959g0010 CAD1 MACPF domain-containing protein CAD1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_18870g0010 No alias MACPF domain-containing protein At4g24290 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g27088 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.04 OrthoFinder output from all 47 species
Nbi_g10192 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.03 OrthoFinder output from all 47 species
Pnu_g02807 CAD1 regulatory protein *(CAD1) of Programmed Cell Death &... 0.01 OrthoFinder output from all 47 species
Ppi_g06926 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.02 OrthoFinder output from all 47 species
Ppi_g16620 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.03 OrthoFinder output from all 47 species
Smo234182 CAD1 MACPF domain-containing protein CAD1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo80474 CAD1 MACPF domain-containing protein CAD1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g005220.3.1 Solyc01g005220 MACPF domain-containing protein At1g14780 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc01g103490.3.1 Solyc01g103490 MACPF domain-containing protein At4g24290 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc02g071780.3.1 CAD1, Solyc02g071780 MACPF domain-containing protein CAD1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc02g077780.3.1 NSL1, Solyc02g077780 MACPF domain-containing protein NSL1 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Solyc04g048950.4.1 Solyc04g048950 MACPF domain-containing protein At4g24290 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc09g098070.3.1 Solyc09g098070 MACPF domain-containing protein At1g14780 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Tin_g09185 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.02 OrthoFinder output from all 47 species
Zm00001e014559_P002 Zm00001e014559 MACPF domain-containing protein At1g14780 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e015755_P005 Zm00001e015755 MACPF domain-containing protein At1g14780 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e019816_P001 CAD1, Zm00001e019816 MACPF domain-containing protein CAD1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e022542_P001 Zm00001e022542 MACPF domain-containing protein At1g14780 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e028292_P001 Zm00001e028292 MACPF domain-containing protein At4g24290 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e029054_P001 CAD1, Zm00001e029054 MACPF domain-containing protein CAD1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR020864 MACPF 103 316
No external refs found!