LOC_Os02g27110.1 (LOC_Os02g27110)


Aliases : LOC_Os02g27110

Description : no hits & (original description: none)


Gene families : OG0000978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000978_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g27110.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00035310 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00089p00157190 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00089p00157880 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00089p00172750 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G48090 No alias calcium-dependent lipid-binding family protein 0.07 OrthoFinder output from all 47 species
Aev_g17458 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g19181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21604 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g32428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42699.t1 Aspi01Gene42699 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55589.t1 Aspi01Gene55589 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G071300.1 Ceric.09G071300 not classified & original description: pacid=50588528... 0.02 OrthoFinder output from all 47 species
Cre17.g728250 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g12763 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013268001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01013270001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01017643001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_15429 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_35998 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g08664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24844 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25510 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10343795g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10426328g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10428265g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10432463g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_119498g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_295252g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_36612g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_58863g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_901094g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g07570.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g38228 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25798 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g48664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g04392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g009350.2.1 Solyc09g009350 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Solyc09g009370.4.1 Solyc09g009370 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 1519 1625
IPR009291 Vps62 1159 1298
IPR009543 VPS13_VAB 2144 2442
IPR031645 VPS13_DH-like 2692 2835
No external refs found!