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  5. LOC_Os08g08220

LOC_Os08g08220 (Os08g0180300)


Aliases : Os08g0180300

Description : 27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related


Gene families : OG_01_0002115 (Gene family) Phylogenetic Tree(s): OG0002115_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os08g08220
Cluster HCCA cluster: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
AT1G50410 No alias SNF2 domain-containing protein / helicase... 0.04 Gene family
AT3G20010 No alias SNF2 domain-containing protein / helicase... 0.03 Gene family
GSVIVT01034370001 No alias 27.3.44 RNA.regulation of transcription.Chromatin... 0.04 Gene family
MA_4534g0010 No alias 27.3.44 RNA.regulation of transcription.Chromatin... 0.03 Gene family
Smo429547 PACid_15417665 27.3.44 RNA.regulation of transcription.Chromatin... 0.03 Gene family
Solyc02g050280.3.1 Solyc02g050280.3 27.3.44 RNA.regulation of transcription.Chromatin... 0.04 Gene family
Zm00001d012624 GRMZM5G829297 27.3.44 RNA.regulation of transcription.Chromatin... 0.03 Gene family
Zm00001d049455 GRMZM2G449355 27.3.44 RNA.regulation of transcription.Chromatin... 0.09 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000330 SNF2_N 292 716
IPR001650 Helicase_C 874 972
No external refs found!