1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g25940.1

LOC_Os02g25940.1 (LOC_Os02g25940)


Aliases : LOC_Os02g25940

Description : histone (H3)


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g25940.1
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00168390 No alias Histone H3.2 OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
Adi_g010032 No alias histone H3 variant *(CENH3) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01156 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g43453 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os06g06460.1 LOC_Os06g06460 histone (H3) 0.04 OrthoFinder output from all 47 species
Mp3g22050.1 No alias histone H3 variant (CENH3) 0.02 OrthoFinder output from all 47 species
Msp_g00861 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04217 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 8 111
No external refs found!