- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : LOC_Os02g25370
Description : no hits & (original description: none)
Gene families : OG0000166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000166_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os02g25370.1 | |
| Cluster | HCCA: Cluster_2 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os01g03590.1 | LOC_Os01g03590 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g04140.1 | LOC_Os01g04140 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os01g18200.1 | LOC_Os01g18200 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os01g19110.1 | LOC_Os01g19110 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g19960.1 | LOC_Os01g19960 | no hits & (original description: none) | 0.19 | OrthoFinder output from all 47 species | |
| LOC_Os01g20190.1 | LOC_Os01g20190 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g33630.1 | LOC_Os01g33630 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g35254.1 | ZAR1, LOC_Os01g35254 | Putative disease resistance protein RGA3 OS=Solanum... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g36766.1 | LOC_Os01g36766 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g38810.1 | LOC_Os01g38810 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g70030.1 | LOC_Os01g70030 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g16120.1 | LOC_Os02g16120 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os02g17110.1 | LOC_Os02g17110 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g25560.1 | LOC_Os02g25560 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os02g49290.1 | LOC_Os02g49290 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os02g51230.1 | LOC_Os02g51230 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os03g07680.1 | LOC_Os03g07680 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g25200.1 | LOC_Os03g25200 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g30080.1 | LOC_Os03g30080 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os04g03350.1 | LOC_Os04g03350 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g03710.1 | LOC_Os04g03710 | Subtilisin-like protease SBT3.10 OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os04g05720.1 | LOC_Os04g05720 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g06100.1 | LOC_Os04g06100 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g07170.1 | LOC_Os04g07170 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os04g10020.1 | LOC_Os04g10020 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g11410.1 | LOC_Os04g11410 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os04g20100.1 | LOC_Os04g20100 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os04g20450.1 | LOC_Os04g20450 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os04g25590.1 | LOC_Os04g25590 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g26360.1 | LOC_Os04g26360 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g28650.1 | LOC_Os04g28650 | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os04g29440.1 | LOC_Os04g29440 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os04g29900.1 | LOC_Os04g29900 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os04g43590.1 | LOC_Os04g43590 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os05g03950.1 | LOC_Os05g03950 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os05g10230.1 | LOC_Os05g10230 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g14000.1 | LOC_Os05g14000 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g14460.1 | LOC_Os05g14460 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g16580.1 | LOC_Os05g16580 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g18990.1 | LOC_Os05g18990 | no hits & (original description: none) | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os05g19700.1 | LOC_Os05g19700 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g27034.1 | LOC_Os05g27034 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g27860.1 | LOC_Os05g27860 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os05g48110.1 | LOC_Os05g48110 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os05g50880.1 | LOC_Os05g50880 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g10380.1 | LOC_Os06g10380 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os06g15050.1 | LOC_Os06g15050 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os06g15340.1 | LOC_Os06g15340 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os06g16540.1 | LOC_Os06g16540 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g19310.1 | LOC_Os06g19310 | no hits & (original description: none) | 0.14 | OrthoFinder output from all 47 species | |
| LOC_Os06g21000.1 | LOC_Os06g21000 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g21150.1 | LOC_Os06g21150 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os06g27900.1 | LOC_Os06g27900 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os06g33030.1 | LOC_Os06g33030 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g35350.1 | LOC_Os06g35350 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os06g42580.1 | LOC_Os06g42580 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g42670.1 | LOC_Os06g42670 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g03350.1 | LOC_Os07g03350 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g03440.1 | LOC_Os07g03440 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g09540.1 | LOC_Os07g09540 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g11430.1 | LOC_Os07g11430 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os07g11850.1 | LOC_Os07g11850 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g15800.1 | LOC_Os07g15800 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g17510.1 | LOC_Os07g17510 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os07g32750.1 | LOC_Os07g32750 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os07g34090.1 | LOC_Os07g34090 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os07g34200.1 | LOC_Os07g34200 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g39610.1 | LOC_Os07g39610 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g46120.1 | LOC_Os07g46120 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os08g04850.1 | LOC_Os08g04850 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os08g08310.1 | LOC_Os08g08310 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g08670.1 | LOC_Os08g08670 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g10230.1 | LOC_Os08g10230 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g12280.1 | LOC_Os08g12280 | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os08g13300.1 | LOC_Os08g13300 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g16080.1 | LOC_Os08g16080 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os08g24250.1 | LOC_Os08g24250 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g27180.1 | LOC_Os08g27180 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g01900.1 | LOC_Os09g01900 | no hits & (original description: none) | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os09g03040.1 | LOC_Os09g03040 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g04200.1 | LOC_Os09g04200 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g06700.1 | LOC_Os09g06700 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os09g07330.1 | LOC_Os09g07330 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g09060.1 | LOC_Os09g09060 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os09g09150.1 | LOC_Os09g09150 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g09420.1 | LOC_Os09g09420 | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os09g11060.1 | LOC_Os09g11060 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g13560.1 | LOC_Os09g13560 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g13660.1 | LOC_Os09g13660 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os09g15610.1 | LOC_Os09g15610 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os09g17290.1 | LOC_Os09g17290 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os09g20130.1 | LOC_Os09g20130 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os09g20450.1 | LOC_Os09g20450 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g25240.1 | LOC_Os09g25240 | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os09g37220.1 | LOC_Os09g37220 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g02010.1 | LOC_Os10g02010 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os10g06660.1 | LOC_Os10g06660 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g07562.1 | LOC_Os10g07562 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os10g08360.1 | LOC_Os10g08360 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g08370.1 | LOC_Os10g08370 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g08650.1 | LOC_Os10g08650 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os10g16800.1 | LOC_Os10g16800 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g19000.1 | LOC_Os10g19000 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g19326.1 | LOC_Os10g19326 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os10g29010.1 | LOC_Os10g29010 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os10g33480.1 | LOC_Os10g33480 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os11g03950.1 | LOC_Os11g03950 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g14350.1 | LOC_Os11g14350 | no hits & (original description: none) | 0.18 | OrthoFinder output from all 47 species | |
| LOC_Os11g23810.1 | LOC_Os11g23810 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os11g24870.1 | LOC_Os11g24870 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os11g26070.1 | LOC_Os11g26070 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os11g31180.1 | LOC_Os11g31180 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g35762.1 | LOC_Os11g35762 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os11g41050.1 | LOC_Os11g41050 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os11g44100.1 | LOC_Os11g44100 | no hits & (original description: none) | 0.13 | OrthoFinder output from all 47 species | |
| LOC_Os11g45490.1 | LOC_Os11g45490 | no hits & (original description: none) | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os12g01870.1 | LOC_Os12g01870 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os12g05240.1 | LOC_Os12g05240 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os12g11600.1 | LOC_Os12g11600 | no hits & (original description: none) | 0.13 | OrthoFinder output from all 47 species | |
| LOC_Os12g14200.1 | LOC_Os12g14200 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os12g16400.1 | LOC_Os12g16400 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os12g22910.1 | LOC_Os12g22910 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g23240.1 | LOC_Os12g23240 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os12g26070.1 | LOC_Os12g26070 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os12g28740.1 | LOC_Os12g28740 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os12g33060.1 | PIN5, LOC_Os12g33060 | auxin transporter (PIN). auxin efflux transporter (PIN) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os12g37240.1 | LOC_Os12g37240 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000723 | telomere maintenance | IEP | HCCA |
| MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006417 | regulation of translation | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | HCCA |
| BP | GO:0017148 | negative regulation of translation | IEP | HCCA |
| MF | GO:0030597 | RNA glycosylase activity | IEP | HCCA |
| MF | GO:0030598 | rRNA N-glycosylase activity | IEP | HCCA |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0032200 | telomere organization | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0034248 | regulation of amide metabolic process | IEP | HCCA |
| BP | GO:0034249 | negative regulation of amide metabolic process | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0048523 | negative regulation of cellular process | IEP | HCCA |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051248 | negative regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |