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  5. LOC_Os02g25060.1

LOC_Os02g25060.1 (NTMC2T1.2, SYTB,...)


Aliases : NTMC2T1.2, SYTB, SYT2, NTMC2TYPE1.2, ATSYTB, LOC_Os02g25060

Description : endoplasmic reticulum-plasma membrane tethering protein (SYTa/b/c)


Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g25060.1

Target Alias Description ECC score Gene Family Method Actions
AT1G20080 NTMC2T1.2, SYTB,... Calcium-dependent lipid-binding (CaLB domain) family protein 0.03 OrthoFinder output from all 47 species
Aev_g21728 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16459 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
Aop_g08587 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Aspi01Gene16885.t1 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38772.t1 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Ceric.07G078600.1 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.05 OrthoFinder output from all 47 species
Ceric.1Z077000.1 SYT5, NTMC2T2.1,... not classified & original description: pacid=50588705... 0.03 OrthoFinder output from all 47 species
Dac_g10256 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.04 OrthoFinder output from all 47 species
Ehy_g01520 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035883001 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_37167 SYT5, NTMC2T2.1,... Synaptotagmin-4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os07g22640.1 NTMC2TYPE4,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g29607 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp3g04720.1 NTMC2TYPE4, NTMC2T4 Synaptotagmin-4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g01232 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g06946 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02231 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014085 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015422 NTMC2TYPE4, NTMC2T4 component *(CPSF100/Ydh1) of Cleavage and... 0.03 OrthoFinder output from all 47 species
Sam_g06349 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g094030.3.1 NTMC2TYPE4,... Synaptotagmin-4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc01g111520.3.1 NTMC2T1.2, SYTB,... endoplasmic reticulum-plasma membrane tethering protein... 0.03 OrthoFinder output from all 47 species
Spa_g38493 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR039010 Synaptotagmin_SMP 67 248
IPR000008 C2_dom 420 521
IPR000008 C2_dom 260 360
No external refs found!