1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g24642.1

LOC_Os02g24642.1 (LOC_Os02g24642)


Aliases : LOC_Os02g24642

Description : component PsbK of PS-II complex


Gene families : OG0007203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007203_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g24642.1

Target Alias Description ECC score Gene Family Method Actions
ATCG00070 PSBK photosystem II reaction center protein K precursor 0.28 OrthoFinder output from all 47 species
Ceric.01G057000.1 PSBI, Ceric.01G057000 component *(PsbI) of PS-II reaction center complex &... 0.18 OrthoFinder output from all 47 species
Ceric.01G057100.1 PSBK, Ceric.01G057100 component *(PsbK) of PS-II complex & original... 0.13 OrthoFinder output from all 47 species
Ceric.01G104900.1 PSBK, Ceric.01G104900 component *(PsbK) of PS-II complex & original... 0.13 OrthoFinder output from all 47 species
Ceric.01G105000.1 PSBI, Ceric.01G105000 component *(PsbI) of PS-II reaction center complex &... 0.18 OrthoFinder output from all 47 species
Ceric.02G012100.1 PSBI, Ceric.02G012100 component *(PsbI) of PS-II reaction center complex &... 0.18 OrthoFinder output from all 47 species
Ceric.12G058300.1 PSBK, Ceric.12G058300 component *(PsbK) of PS-II complex & original... 0.13 OrthoFinder output from all 47 species
Ceric.13G052800.1 PSBI, Ceric.13G052800 component *(PsbI) of PS-II reaction center complex &... 0.18 OrthoFinder output from all 47 species
Ceric.1Z023200.1 PSBI, Ceric.1Z023200 component *(PsbI) of PS-II reaction center complex &... 0.18 OrthoFinder output from all 47 species
Ceric.1Z116900.1 PSBK, Ceric.1Z116900 component *(PsbK) of PS-II complex & original... 0.11 OrthoFinder output from all 47 species
Ceric.1Z117000.1 PSBI, Ceric.1Z117000 component *(PsbI) of PS-II reaction center complex &... 0.18 OrthoFinder output from all 47 species
Ceric.26G042600.1 PSBK, Ceric.26G042600 component *(PsbK) of PS-II complex & original... 0.13 OrthoFinder output from all 47 species
Ceric.29G005500.1 PSBI, Ceric.29G005500 component *(PsbI) of PS-II reaction center complex &... 0.18 OrthoFinder output from all 47 species
Ceric.29G005600.1 PSBK, Ceric.29G005600 component *(PsbK) of PS-II complex & original... 0.13 OrthoFinder output from all 47 species
GSVIVT01037458001 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.06 OrthoFinder output from all 47 species
Smo137749 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.05 OrthoFinder output from all 47 species
Solyc00g500049.1.1 PSBK, Solyc00g500049 component PsbI of PS-II reaction center complex.... 0.28 OrthoFinder output from all 47 species
Solyc00g500132.1.1 PSBK, Solyc00g500132 component PsbI of PS-II reaction center complex.... 0.28 OrthoFinder output from all 47 species
Solyc00g500202.1.1 PSBK, Solyc00g500202 component PsbI of PS-II reaction center complex.... 0.28 OrthoFinder output from all 47 species
Solyc00g500293.1.1 PSBK, Solyc00g500293 component PsbI of PS-II reaction center complex.... 0.3 OrthoFinder output from all 47 species
Solyc00g500331.1.1 PSBK, Solyc00g500331 component PsbI of PS-II reaction center complex.... 0.28 OrthoFinder output from all 47 species
Zm00001e042045_P001 PSBK, Zm00001e042045 component PsbK of PS-II complex 0.14 OrthoFinder output from all 47 species
Zm00001e042111_P001 PSBK, Zm00001e042111 component PsbK of PS-II complex 0.15 OrthoFinder output from all 47 species
Zm00001e042159_P001 PSBK, Zm00001e042159 component PsbK of PS-II complex 0.15 OrthoFinder output from all 47 species
Zm00001e042175_P001 PSBK, Zm00001e042175 component PsbK of PS-II complex 0.14 OrthoFinder output from all 47 species
Zm00001e042230_P001 PSBK, Zm00001e042230 component PsbK of PS-II complex 0.15 OrthoFinder output from all 47 species
Zm00001e042357_P001 PSBK, Zm00001e042357 component PsbK of PS-II complex 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009539 photosystem II reaction center IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003687 PSII_PsbK 22 61
No external refs found!