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  5. LOC_Os02g24574.1

LOC_Os02g24574.1 (NDHG, LOC_Os02g24574)


Aliases : NDHG, LOC_Os02g24574

Description : component NdhG of NDH membrane subcomplex M


Gene families : OG0009868 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009868_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g24574.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
ATCG01080 NDHG NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 0.46 OrthoFinder output from all 47 species
Aev_g16760 NDHG component *(NdhG) of NDH membrane subcomplex M &... 0.46 OrthoFinder output from all 47 species
Ala_g01978 NDHG component *(NdhG) of NDH membrane subcomplex M &... 0.04 OrthoFinder output from all 47 species
Ceric.05G045500.1 NDHG, Ceric.05G045500 component *(NdhG) of NDH membrane subcomplex M &... 0.12 OrthoFinder output from all 47 species
Ceric.09G048800.1 NDHG, Ceric.09G048800 component *(NdhG) of NDH membrane subcomplex M &... 0.12 OrthoFinder output from all 47 species
Ceric.09G082100.1 NDHG, Ceric.09G082100 component *(NdhG) of NDH membrane subcomplex M &... 0.07 OrthoFinder output from all 47 species
Ceric.18G053300.1 NDHG, Ceric.18G053300 component *(NdhG) of NDH membrane subcomplex M &... 0.16 OrthoFinder output from all 47 species
Ceric.23G033600.1 NDHG, Ceric.23G033600 component *(NdhG) of NDH membrane subcomplex M &... 0.1 OrthoFinder output from all 47 species
Ceric.35G068300.1 NDHG, Ceric.35G068300 component *(NdhG) of NDH membrane subcomplex M &... 0.16 OrthoFinder output from all 47 species
Dde_g43453 NDHG component *(NdhG) of NDH membrane subcomplex M &... 0.09 OrthoFinder output from all 47 species
Gb_40561 No alias component NdhG of NDH membrane subcomplex M 0.17 OrthoFinder output from all 47 species
Nbi_g00517 NDHG component *(NdhG) of NDH membrane subcomplex M &... 0.12 OrthoFinder output from all 47 species
Pnu_g01142 NDHG component *(NdhG) of NDH membrane subcomplex M &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0131.g022093 NDHG component *(NdhG) of NDH membrane subcomplex M &... 0.11 OrthoFinder output from all 47 species
Smo137798 NDHG Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.19 OrthoFinder output from all 47 species
Solyc03g013600.1.1 NDHG, Solyc03g013600 component NdhG of NDH membrane subcomplex M 0.37 OrthoFinder output from all 47 species
Solyc07g026910.3.1 NDHG, Solyc07g026910 component NdhG of NDH membrane subcomplex M 0.36 OrthoFinder output from all 47 species
Solyc11g021217.1.1 NDHG, Solyc11g021217 component NdhG of NDH membrane subcomplex M 0.16 OrthoFinder output from all 47 species
Tin_g19565 NDHG component *(NdhG) of NDH membrane subcomplex M &... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001457 NADH_UbQ/plastoQ_OxRdtase_su6 23 172
No external refs found!