LOC_Os02g22020.1 (LOC_Os02g22020)


Aliases : LOC_Os02g22020

Description : G2-like GARP transcription factor


Gene families : OG0001052 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001052_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g22020.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00241280 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Adi_g059187 No alias GARP subgroup HHO transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aev_g37049 No alias GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g02230 No alias GARP subgroup HHO transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.06G020200.1 Ceric.06G020200 GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g43886 No alias GARP subgroup HHO transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dde_g09341 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g10381 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g15561 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g16275 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01011942001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Pir_g14104 No alias GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g31164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003080_P001 Zm00001e003080 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 237 288
No external refs found!