LOC_Os01g72370.1


Description : transcription factor (bHLH). iron/copper homeostasis regulator. bHLH-Ib iron/copper homeostasis regulator


Gene families : OG_01_0003858 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003858_tree ,
OG_02_0002668 (LandPlants) Phylogenetic Tree(s): OG_02_0002668_tree ,
OG_03_0001945 (SeedPlants) Phylogenetic Tree(s): OG_03_0001945_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g72370.1
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00063p00154030 evm_27.TU.AmTr_v1... Nutrient uptake.copper uptake.regulation.bHLH-Ib... 0.03 Archaeplastida
AT2G41240 BHLH100 basic helix-loop-helix protein 100 0.14 Archaeplastida
AT3G56970 ORG2, BHLH038 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.13 Archaeplastida
AT3G56980 ORG3, BHLH039 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.13 Archaeplastida
AT5G04150 BHLH101 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.14 Archaeplastida
Solyc10g079650.2.1 No alias transcription factor (bHLH). iron/copper homeostasis... 0.03 Archaeplastida
Solyc10g079660.3.1 No alias transcription factor (bHLH). iron/copper homeostasis... 0.03 Archaeplastida
Zm00001e018588_P001 No alias transcription factor (bHLH). iron/copper homeostasis... 0.06 Archaeplastida
Zm00001e028309_P001 No alias transcription factor (bHLH). iron/copper homeostasis... 0.06 Archaeplastida
AMTR_s00002p00041060 evm_27.TU.AmTr_v1... Nutrient uptake.copper uptake.regulation.bHLH-Ib... 0.02 LandPlants
AMTR_s00063p00154030 evm_27.TU.AmTr_v1... Nutrient uptake.copper uptake.regulation.bHLH-Ib... 0.03 LandPlants
AT2G41240 BHLH100 basic helix-loop-helix protein 100 0.12 LandPlants
AT3G56970 ORG2, BHLH038 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.11 LandPlants
AT3G56980 ORG3, BHLH039 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.11 LandPlants
AT5G04150 BHLH101 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.12 LandPlants
Solyc10g079650.2.1 No alias transcription factor (bHLH). iron/copper homeostasis... 0.02 LandPlants
Solyc10g079660.3.1 No alias transcription factor (bHLH). iron/copper homeostasis... 0.02 LandPlants
Zm00001e018588_P001 No alias transcription factor (bHLH). iron/copper homeostasis... 0.06 LandPlants
Zm00001e028309_P001 No alias transcription factor (bHLH). iron/copper homeostasis... 0.06 LandPlants
AMTR_s00002p00041060 evm_27.TU.AmTr_v1... Nutrient uptake.copper uptake.regulation.bHLH-Ib... 0.02 SeedPlants
AMTR_s00063p00154030 evm_27.TU.AmTr_v1... Nutrient uptake.copper uptake.regulation.bHLH-Ib... 0.03 SeedPlants
AT2G41240 BHLH100 basic helix-loop-helix protein 100 0.1 SeedPlants
AT3G56970 ORG2, BHLH038 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.09 SeedPlants
AT3G56980 ORG3, BHLH039 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.09 SeedPlants
AT5G04150 BHLH101 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.1 SeedPlants
MA_93509g0010 No alias no hits & (original description: none) 0.02 SeedPlants
MA_93509g0020 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc10g079650.2.1 No alias transcription factor (bHLH). iron/copper homeostasis... 0.02 SeedPlants
Solyc10g079660.3.1 No alias transcription factor (bHLH). iron/copper homeostasis... 0.02 SeedPlants
Zm00001e018588_P001 No alias transcription factor (bHLH). iron/copper homeostasis... 0.06 SeedPlants
Zm00001e028309_P001 No alias transcription factor (bHLH). iron/copper homeostasis... 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 69 121
No external refs found!