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  5. LOC_Os02g20850.1

LOC_Os02g20850.1 (ATRAC1, ROP3, ATGP2,...)


Aliases : ATRAC1, ROP3, ATGP2, ARAC1, ATROP3, LOC_Os02g20850

Description : small GTPase (ROP)


Gene families : OG0000503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g20850.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00186910 ATRAC11, ARAC11,... Multi-process regulation.Rop GTPase regulatory... 0.07 OrthoFinder output from all 47 species
AT1G75840 ATROP4, ROP4,... RAC-like GTP binding protein 5 0.05 OrthoFinder output from all 47 species
AT3G51300 ATRAC11, ARAC11,... RHO-related protein from plants 1 0.04 OrthoFinder output from all 47 species
AT4G35020 ARAC3, RAC3,... RAC-like 3 0.03 OrthoFinder output from all 47 species
AT5G45970 ARAC2, RAC2,... RAC-like 2 0.1 OrthoFinder output from all 47 species
Adi_g003765 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g051525 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g051539 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g051540 ATRAC11, ARAC11,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g068546 ATROP4, ROP4,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g25534 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39511 ATROP4, ROP4,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01235 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06146 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22369 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51905 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06422 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g03079 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03732 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38810 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene15444.t1 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22273.t1 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50526.t1 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27597 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G052700.1 ARAC3, RAC3,... small GTPase *(ROP) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.36G016200.1 ARAC3, RAC3,... small GTPase *(ROP) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.38G025400.1 ATRAC11, ARAC11,... small GTPase *(ROP) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g02090 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g03585 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04531 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g42232 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05325 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07418 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08696 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09488 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17256 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07708 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18052 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009947001 ATRAC1, ROP3,... Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
GSVIVT01015359001 ARAC7, ROP9,... Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
GSVIVT01018729001 ATRAC1, ROP3,... Multi-process regulation.Rop GTPase regulatory... 0.04 OrthoFinder output from all 47 species
GSVIVT01020653001 ATROP4, ROP4,... Multi-process regulation.Rop GTPase regulatory... 0.06 OrthoFinder output from all 47 species
GSVIVT01021145001 ARAC2, RAC2,... Multi-process regulation.Rop GTPase regulatory... 0.04 OrthoFinder output from all 47 species
GSVIVT01024029001 ATRAC1, ROP3,... Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
Gb_16923 ATRAC11, ARAC11,... small GTPase (ROP) 0.05 OrthoFinder output from all 47 species
LOC_Os05g43820.1 ARAC7, ROP9,... small GTPase (ROP) 0.04 OrthoFinder output from all 47 species
MA_10426447g0010 ATRAC4, ARAC4,... small GTPase (ROP) 0.05 OrthoFinder output from all 47 species
MA_36432g0010 ARAC3, RAC3,... small GTPase (ROP) 0.04 OrthoFinder output from all 47 species
MA_55260g0010 ATRAC11, ARAC11,... small GTPase (ROP) 0.03 OrthoFinder output from all 47 species
MA_948089g0010 ATRAC11, ARAC11,... small GTPase (ROP) 0.03 OrthoFinder output from all 47 species
Msp_g11271 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g38983 ATRAC11, ARAC11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01865 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05700 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13115 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04924 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11624 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11648 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14285 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004935 ATROP4, ROP4,... small GTPase *(ROP) & original description: CDS=382-930 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020708 ARAC3, RAC3,... small GTPase *(ROP) & original description: CDS=388-1065 0.02 OrthoFinder output from all 47 species
Sam_g07595 No alias small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g23832 No alias small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51099 No alias small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51141 No alias small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g077400.4.1 ARAC2, RAC2,... small GTPase (ROP) 0.06 OrthoFinder output from all 47 species
Solyc03g114070.3.1 ATRAC8, ATROP10,... small GTPase (ROP) 0.02 OrthoFinder output from all 47 species
Spa_g10601 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29989 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g36415 ARAC3, RAC3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03089 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05437 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e031297_P001 ARAC7, ROP9,... small GTPase (ROP) 0.03 OrthoFinder output from all 47 species
Zm00001e036080_P001 ATRAC8, ATROP10,... small GTPase (ROP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 8 177
No external refs found!