LOC_Os01g72240.1


Description : UMP synthase


Gene families : OG_01_0003968 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003968_tree ,
OG_02_0004585 (LandPlants) Phylogenetic Tree(s): OG_02_0004585_tree ,
OG_03_0005241 (SeedPlants) Phylogenetic Tree(s): OG_03_0005241_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g72240.1
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AT3G54470 No alias uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) 0.04 Archaeplastida
MA_43985g0010 No alias UMP synthase 0.04 Archaeplastida
Mp6g00970.1 No alias UMP synthase 0.03 Archaeplastida
Pp3c3_16990V3.1 No alias uridine 5\-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) 0.02 Archaeplastida
AT3G54470 No alias uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) 0.02 LandPlants
MA_43985g0010 No alias UMP synthase 0.04 LandPlants
Mp6g00970.1 No alias UMP synthase 0.03 LandPlants
Pp3c3_16990V3.1 No alias uridine 5\-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) 0.02 LandPlants
AT3G54470 No alias uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) 0.03 SeedPlants
MA_43985g0010 No alias UMP synthase 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEA Interproscan
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEA Interproscan
BP GO:0009116 nucleoside metabolic process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001754 OMPdeCOase_dom 245 464
IPR000836 PRibTrfase_dom 43 157
No external refs found!