LOC_Os08g07700 (Os08g0173700)


Aliases : Os08g0173700

Description : 17.5.2 hormone metabolism.ethylene.signal transduction Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (LEAFY PETIOLE). The protein ?//CONTAINS one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. Acts as a positive regulator of gibberellic acid-induced germination.


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os08g07700
Cluster HCCA cluster: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AT1G24590 DRN-LIKE, ESR2,... DORNROSCHEN-like 0.02 Gene family
AT1G28160 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT1G44830 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT4G13620 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G13330 Rap2.6L related to AP2 6l 0.02 Gene family
AT5G25390 SHN2 Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G50080 ERF110 ethylene response factor 110 0.03 Gene family
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
GSVIVT01001089001 No alias No description available 0.03 Gene family
GSVIVT01018270001 No alias No description available 0.02 Gene family
GSVIVT01018271001 No alias No description available 0.02 Gene family
GSVIVT01018272001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
GSVIVT01028314001 No alias No description available 0.02 Gene family
GSVIVT01032961001 No alias No description available 0.02 Gene family
GSVIVT01032983001 No alias No description available 0.03 Gene family
GSVIVT01036389001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os01g10370 Os01g0200600 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os01g54890 Os01g0752500 No description available 0.02 Gene family
LOC_Os01g66270 Os01g0885900 No description available 0.02 Gene family
LOC_Os02g13710 Os02g0231000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g42585 Os02g0638650 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
LOC_Os02g43970 Os02g0657000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
LOC_Os03g60120 Os03g0815800 No description available 0.02 Gene family
LOC_Os06g11940 Os06g0223100 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os06g40150 Os06g0604000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
LOC_Os08g35240 Os08g0454000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os09g28440 Os09g0457900 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
LOC_Os10g25170 Os10g0390800 No description available 0.02 Gene family
MA_104230g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
MA_116185g0010 No alias No description available 0.01 Gene family
MA_179692g0020 No alias No description available 0.02 Gene family
MA_198113g0010 No alias No description available 0.02 Gene family
MA_27309g0010 No alias No description available 0.02 Gene family
MA_411387g0010 No alias No description available 0.01 Gene family
MA_42369g0010 No alias No description available 0.02 Gene family
MA_490022g0010 No alias No description available 0.02 Gene family
MA_54341g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
MA_6447416g0010 No alias No description available 0.02 Gene family
MA_7960347g0010 No alias No description available 0.02 Gene family
MA_896002g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_9321671g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
MA_9905g0010 No alias No description available 0.02 Gene family
Solyc02g077360.1.1 Solyc02g077360.1 No description available 0.02 Gene family
Solyc03g005500.1.1 Solyc03g005500.1 No description available 0.02 Gene family
Solyc04g072300.1.1 Solyc04g072300.1 No description available 0.04 Gene family
Solyc04g080910.1.1 Solyc04g080910.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc05g050790.2.1 Solyc05g050790.2 No description available 0.05 Gene family
Solyc06g065820.3.1 Solyc06g065820.3 No description available 0.02 Gene family
Solyc06g068360.3.1 Solyc06g068360.3 No description available 0.02 Gene family
Solyc09g091950.1.1 Solyc09g091950.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d000339 GRMZM2G174347 No description available 0.03 Gene family
Zm00001d001907 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d005892 GRMZM2G138396 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d008872 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d015759 GRMZM2G085678 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d016616 GRMZM2G016434 No description available 0.03 Gene family
Zm00001d016623 GRMZM2G047999 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d017477 GRMZM5G842961 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d024324 GRMZM2G020054 No description available 0.03 Gene family
Zm00001d024436 GRMZM2G055070 No description available 0.05 Gene family
Zm00001d026271 GRMZM2G438202 No description available 0.03 Gene family
Zm00001d026563 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d027925 GRMZM2G018984 No description available 0.02 Gene family
Zm00001d043205 GRMZM2G310368 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d044857 GRMZM5G852704 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d044950 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d046501 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
Zm00001d049364 GRMZM2G089995 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d049889 GRMZM2G156737 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d051355 GRMZM2G072926 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d052167 GRMZM2G173771 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 37 83
No external refs found!