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  5. LOC_Os01g72210.1

LOC_Os01g72210.1


Description : calcium-permeable channel (OSCA)


Gene families : OG_01_0000175 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000175_tree ,
OG_02_0001215 (LandPlants) Phylogenetic Tree(s): OG_02_0001215_tree ,
OG_03_0010928 (SeedPlants) Phylogenetic Tree(s): OG_03_0010928_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g72210.1
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00143150 evm_27.TU.AmTr_v1... Solute transport.channels.OSCA calcium-permeable channel 0.02 Archaeplastida
AT1G10090 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 Archaeplastida
AT4G04340 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Archaeplastida
GSVIVT01000831001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.08 Archaeplastida
GSVIVT01011543001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.03 Archaeplastida
Smo139283 No alias Solute transport.channels.OSCA calcium-permeable channel 0.03 Archaeplastida
Solyc01g068500.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e003059_P001 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida
AT1G10090 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 LandPlants
GSVIVT01000831001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.07 LandPlants
Smo139283 No alias Solute transport.channels.OSCA calcium-permeable channel 0.03 LandPlants
Solyc01g068500.4.1 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e003059_P001 No alias calcium-permeable channel (OSCA) 0.03 LandPlants
GSVIVT01000831001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.07 SeedPlants
Solyc01g068500.4.1 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032880 Csc1_N 6 164
IPR027815 PHM7_cyt 185 340
IPR003864 RSN1_7TM 352 614
No external refs found!