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  5. LOC_Os02g18450.1

LOC_Os02g18450.1 (LOC_Os02g18450)


Aliases : LOC_Os02g18450

Description : Putative elongation factor TypA-like SVR3, chloroplastic OS=Arabidopsis thaliana (sp|f4k410|svr3_arath : 1028.0)


Gene families : OG0002241 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002241_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g18450.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g006702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g28778 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g09823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23569 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13308 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene40097.t1 Aspi01Gene40097 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0112.g045786 No alias not classified & original description: CDS=152-2350 0.05 OrthoFinder output from all 47 species
Cba_g21532 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.34G006900.1 Ceric.34G006900 not classified & original description: pacid=50624161... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020614.28 No alias Putative elongation factor TypA-like SVR3, chloroplastic... 0.03 OrthoFinder output from all 47 species
Cre07.g335200 No alias Putative elongation factor TypA-like SVR3, chloroplastic... 0.03 OrthoFinder output from all 47 species
Dac_g14982 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g02920 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g16519 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g02805 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01033307001 No alias Putative elongation factor TypA-like SVR3, chloroplastic... 0.03 OrthoFinder output from all 47 species
Gb_15061 No alias Putative elongation factor TypA-like SVR3, chloroplastic... 0.06 OrthoFinder output from all 47 species
Len_g30438 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02041 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_138810g0010 No alias Putative elongation factor TypA-like SVR3, chloroplastic... 0.02 OrthoFinder output from all 47 species
Msp_g25907 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g08358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28212 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19686 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pnu_g03149 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14425 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g19777 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Smo145812 No alias Putative elongation factor TypA-like SVR3, chloroplastic... 0.09 OrthoFinder output from all 47 species
Solyc03g058190.3.1 Solyc03g058190 Putative elongation factor TypA-like SVR3, chloroplastic... 0.07 OrthoFinder output from all 47 species
Spa_g07228 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g02062 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e014138_P001 Zm00001e014138 Putative elongation factor TypA-like SVR3, chloroplastic... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
InterPro domains Description Start Stop
IPR000640 EFG_V-like 468 553
IPR000795 T_Tr_GTP-bd_dom 76 267
IPR004161 EFTu-like_2 291 360
No external refs found!