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  5. LOC_Os02g18410.1

LOC_Os02g18410.1 (PCAP1, ATPCAP1, LOC_Os02g18410)


Aliases : PCAP1, ATPCAP1, LOC_Os02g18410

Description : Plasma membrane-associated cation-binding protein 1 OS=Arabidopsis thaliana (sp|q96262|pcap1_arath : 100.0)


Gene families : OG0002064 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g18410.1
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AT4G20260 PCAP1, ATPCAP1 plasma-membrane associated cation-binding protein 1 0.05 OrthoFinder output from all 47 species
Adi_g078581 No alias phosphoinositide signalling effector *(PCaP) & original... 0.02 OrthoFinder output from all 47 species
Aev_g36750 PCAP1, ATPCAP1 phosphoinositide signalling effector *(PCaP) & original... 0.05 OrthoFinder output from all 47 species
Als_g26388 PCAP1, ATPCAP1 phosphoinositide signalling effector *(PCaP) & original... 0.06 OrthoFinder output from all 47 species
Als_g36529 PCAP1, ATPCAP1 phosphoinositide signalling effector *(PCaP) & original... 0.02 OrthoFinder output from all 47 species
Als_g38442 PCAP1, ATPCAP1 phosphoinositide signalling effector *(PCaP) & original... 0.02 OrthoFinder output from all 47 species
Aop_g37555 PCAP1, ATPCAP1 phosphoinositide signalling effector *(PCaP) & original... 0.04 OrthoFinder output from all 47 species
Cba_g01673 PCAP1, ATPCAP1 phosphoinositide signalling effector *(PCaP) & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G090100.1 Ceric.01G090100 phosphoinositide signalling effector *(PCaP) & original... 0.05 OrthoFinder output from all 47 species
Dac_g37225 PCAP1, ATPCAP1 phosphoinositide signalling effector *(PCaP) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g02451 PCAP1, ATPCAP1 phosphoinositide signalling effector *(PCaP) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g03535 No alias phosphoinositide signalling effector *(PCaP) & original... 0.06 OrthoFinder output from all 47 species
Dcu_g43053 PCAP1, ATPCAP1 phosphoinositide signalling effector *(PCaP) & original... 0.03 OrthoFinder output from all 47 species
Dde_g30214 PCAP1, ATPCAP1 phosphoinositide signalling effector *(PCaP) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01001340001 PCAP1, ATPCAP1 Plasma membrane-associated cation-binding protein 1... 0.03 OrthoFinder output from all 47 species
Gb_09198 No alias Plasma membrane-associated cation-binding protein 1... 0.03 OrthoFinder output from all 47 species
Gb_32620 PCAP1, ATPCAP1 Plasma membrane-associated cation-binding protein 1... 0.04 OrthoFinder output from all 47 species
MA_15276g0010 PCAP1, ATPCAP1 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_209808g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_30683g0010 PCAP1, ATPCAP1 Plasma membrane-associated cation-binding protein 1... 0.04 OrthoFinder output from all 47 species
Mp4g05850.1 No alias Plasma membrane-associated cation-binding protein 1... 0.06 OrthoFinder output from all 47 species
Msp_g09848 PCAP1, ATPCAP1 phosphoinositide signalling effector *(PCaP) & original... 0.05 OrthoFinder output from all 47 species
Nbi_g39657 PCAP1, ATPCAP1 phosphoinositide signalling effector *(PCaP) & original... 0.03 OrthoFinder output from all 47 species
Pir_g65218 PCAP1, ATPCAP1 phosphoinositide signalling effector *(PCaP) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0162.g023991 PCAP1, ATPCAP1 phosphoinositide signalling effector *(PCaP) & original... 0.03 OrthoFinder output from all 47 species
Spa_g28981 PCAP1, ATPCAP1 phosphoinositide signalling effector *(PCaP) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e014131_P002 PCAP1, ATPCAP1,... Plasma membrane-associated cation-binding protein 1... 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0046658 obsolete anchored component of plasma membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR008469 DREPP 1 215
No external refs found!