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  5. LOC_Os02g17870.1

LOC_Os02g17870.1 (LOC_Os02g17870)


Aliases : LOC_Os02g17870

Description : no hits & (original description: none)


Gene families : OG0004116 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004116_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g17870.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00098480 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT4G08580 No alias microfibrillar-associated protein-related 0.06 OrthoFinder output from all 47 species
Adi_g012809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060855 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G063600.1 Ceric.34G063600 not classified & original description: pacid=50623043... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020539.41 No alias No description available 0.03 OrthoFinder output from all 47 species
Cre05.g232950 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g05082 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11516 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_261g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp1g23320.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Sam_g28460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g100500.3.1 Solyc01g100500 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Zm00001e024108_P001 Zm00001e024108 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR009730 MFAP1_C 168 389
No external refs found!