1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g17650.1

LOC_Os02g17650.1 (ATSDX1, VTE1, LOC_Os02g17650)


Aliases : ATSDX1, VTE1, LOC_Os02g17650

Description : tocopherol cyclase (VTE1/TC)


Gene families : OG0003844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003844_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g17650.1

Target Alias Description ECC score Gene Family Method Actions
Ceric.02G019700.1 ATSDX1, VTE1,... tocopherol cyclase *(VTE1/TC) & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g19556 ATSDX1, VTE1 tocopherol cyclase *(VTE1/TC) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44206 ATSDX1, VTE1 tocopherol cyclase *(VTE1/TC) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g068570.4.1 ATSDX1, VTE1,... tocopherol cyclase (VTE1/TC) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009976 tocopherol cyclase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017150 tRNA dihydrouridine synthase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0106413 dihydrouridine synthase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR025893 Tocopherol_cyclase 74 429
No external refs found!