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  5. LOC_Os02g17460.1

LOC_Os02g17460.1 (LOC_Os02g17460)


Aliases : LOC_Os02g17460

Description : CPP1-like transcription factor


Gene families : OG0003303 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g17460.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00086600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.CPP1-like... 0.03 OrthoFinder output from all 47 species
AT4G29000 No alias Tesmin/TSO1-like CXC domain-containing protein 0.05 OrthoFinder output from all 47 species
Aspi01Gene15000.t1 Aspi01Gene15000 TCX/CPP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cre11.g481800 No alias RNA biosynthesis.transcriptional activation.CPP1-like... 0.01 OrthoFinder output from all 47 species
Pir_g08662 No alias TCX/CPP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07690 No alias TCX/CPP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14904 No alias TCX/CPP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029008_P001 Zm00001e029008 CPP1-like transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR005172 CRC 61 95
IPR005172 CRC 146 181
No external refs found!