LOC_Os02g15820.1 (LOC_Os02g15820)


Aliases : LOC_Os02g15820

Description : no hits & (original description: none)


Gene families : OG0001232 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001232_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g15820.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g056607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13885 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g43944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13027.t1 Aspi01Gene13027 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46515.t1 Aspi01Gene46515 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0061.g034992 No alias not classified & original description: CDS=1177-2823 0.03 OrthoFinder output from all 47 species
Azfi_s0389.g067652 No alias not classified & original description: CDS=131-2617 0.05 OrthoFinder output from all 47 species
Dac_g16946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04945 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16706 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019501001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_15603 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g20340.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g08412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49023 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19328 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014265_P001 Zm00001e014265 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e024817_P001 Zm00001e024817 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e037062_P001 Zm00001e037062 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021480 Zinc_ribbon_12 439 483
No external refs found!