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  5. LOC_Os02g15120.1

LOC_Os02g15120.1 (ATL6, LOC_Os02g15120)


Aliases : ATL6, LOC_Os02g15120

Description : RING-H2-class E3 ligase


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g15120.1
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00044p00112360 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
AT1G22500 No alias RING/U-box superfamily protein 0.09 OrthoFinder output from all 47 species
AT1G35330 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G49220 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G72200 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G18670 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G35910 No alias RING/U-box superfamily protein 0.07 OrthoFinder output from all 47 species
Adi_g011787 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Adi_g045665 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Adi_g060420 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Adi_g118032 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g13717 BRH1 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Als_g14419 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Als_g30397 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g03297 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aob_g04978 XERICO E3 ubiquitin ligase *(BRH) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06027 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aop_g20499 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene36586.t1 Aspi01Gene36586 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene46835.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63855.t1 Aspi01Gene63855 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Azfi_s0093.g043306 No alias not classified & original description: CDS=1-900 0.04 OrthoFinder output from all 47 species
Azfi_s0109.g045400 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Cba_g03683 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.01G098400.1 Ceric.01G098400 not classified & original description: pacid=50591772... 0.02 OrthoFinder output from all 47 species
Ceric.02G105300.1 ATL8, Ceric.02G105300 not classified & original description: pacid=50585310... 0.04 OrthoFinder output from all 47 species
Ceric.07G057600.1 Ceric.07G057600 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.07G058000.1 Ceric.07G058000 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.09G083300.1 Ceric.09G083300 not classified & original description: pacid=50586861... 0.03 OrthoFinder output from all 47 species
Ceric.10G008300.1 Ceric.10G008300 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Ceric.10G020700.1 RHA2A, Ceric.10G020700 not classified & original description: pacid=50612578... 0.04 OrthoFinder output from all 47 species
Ceric.12G062900.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.13G075200.1 Ceric.13G075200 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.18G057400.1 RHA3A, Ceric.18G057400 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.21G001200.1 Ceric.21G001200 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.25G039000.1 Ceric.25G039000 not classified & original description: pacid=50594534... 0.04 OrthoFinder output from all 47 species
Ceric.29G079800.1 Ceric.29G079800 not classified & original description: pacid=50625628... 0.03 OrthoFinder output from all 47 species
Ceric.29G079900.1 ATL6, Ceric.29G079900 not classified & original description: pacid=50625410... 0.03 OrthoFinder output from all 47 species
Ceric.34G017800.1 Ceric.34G017800 not classified & original description: pacid=50623173... 0.04 OrthoFinder output from all 47 species
Ceric.38G004700.1 Ceric.38G004700 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g01390 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g07458 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dcu_g01132 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Dcu_g07013 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g17070 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dde_g09705 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dde_g22839 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g24499 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g26468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26838 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g27968 ATL4H RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g30250 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01008754001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_04642 ATL2, TL2 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Gb_23076 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Gb_39486 No alias RING-H2 finger protein ATL16 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os05g29150.1 ATL8, LOC_Os05g29150 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g02205 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Len_g20513 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Len_g23800 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g35609 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g24829 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Lfl_g27111 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10429091g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_152102g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_17249g0010 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_223841g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_38494g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_51630g0010 No alias RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
MA_8362328g0010 XERICO Probable E3 ubiquitin-protein ligase XERICO... 0.04 OrthoFinder output from all 47 species
MA_92400g0010 RHA3B RING-H2-class E3 ligase 0.06 OrthoFinder output from all 47 species
Msp_g19472 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Nbi_g05230 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Nbi_g12750 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g22108 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g05275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20730 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g00880 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g01265 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g15924 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g17973 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g21852 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ppi_g61044 RHA3A RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005176 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008886 No alias not classified & original description: CDS=1-492 0.03 OrthoFinder output from all 47 species
Smo137213 ATL5 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Smo423895 ATL43 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Smo441685 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Solyc01g088450.2.1 Solyc01g088450 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc06g150136.1.1 Solyc06g150136 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Spa_g07427 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g24936 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Spa_g40874 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Spa_g53569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010029_P001 XERICO, Zm00001e010029 ubiquitin protein ligase (XERICO) 0.04 OrthoFinder output from all 47 species
Zm00001e014302_P001 Zm00001e014302 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e015445_P001 BRH1, Zm00001e015445 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e023234_P001 BRH1, Zm00001e023234 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e030136_P001 Zm00001e030136 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e031874_P001 Zm00001e031874 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e035560_P001 ATL3, Zm00001e035560 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e036691_P001 Zm00001e036691 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e037107_P001 Zm00001e037107 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Zm00001e041385_P001 Zm00001e041385 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 119 162
No external refs found!