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  5. LOC_Os02g15100.1

LOC_Os02g15100.1 (ATL2, TL2, LOC_Os02g15100)


Aliases : ATL2, TL2, LOC_Os02g15100

Description : RING-H2 finger protein ATL40 OS=Arabidopsis thaliana (sp|q9slc4|atl40_arath : 83.6)


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g15100.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT1G22500 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G23980 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G76410 ATL8 RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G18773 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g012488 RHA3A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079274 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Adi_g111511 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ala_g08784 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g00547 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g00872 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g03039 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g52149 ATL5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06027 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aop_g00286 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g05316 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g16315 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g17775 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36854 BRH1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g57707 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene16999.t2 ATL6, Aspi01Gene16999 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene28894.t1 BRH1, Aspi01Gene28894 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Cba_g05155 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Cba_g05766 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Cba_g17028 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Cba_g20209 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Cba_g23004 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Cba_g26664 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Cba_g29676 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Cba_g43673 No alias E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g70777 BRH1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.22G020900.1 ATL43, Ceric.22G020900 not classified & original description: pacid=50614198... 0.04 OrthoFinder output from all 47 species
Ceric.22G061900.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Ceric.26G027500.1 Ceric.26G027500 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.30G049300.1 Ceric.30G049300 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.38G004700.1 Ceric.38G004700 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g05542 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g10168 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dac_g22588 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Dac_g33447 MEE16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06581 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g07523 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g16355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26675 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01022306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01028038001 ATL2, TL2 Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
LOC_Os02g15080.1 LOC_Os02g15080 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os02g52210.1 ATL31, CNI1,... RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os02g54830.1 LOC_Os02g54830 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os04g16970.1 LOC_Os04g16970 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g12736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g29571 BRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g29725 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Len_g44328 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Len_g59507 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Lfl_g04047 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Lfl_g22800 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Lfl_g24812 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431161g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10434759g0010 BRH1 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10436028g0010 No alias RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
MA_17249g0010 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp4g04600.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g18702 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Msp_g26056 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Msp_g36004 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Nbi_g14075 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Nbi_g43120 ATL31, CNI1 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ore_g16147 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g29694 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g01265 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g02738 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g07714 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Pir_g15924 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Pir_g15928 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Pir_g18035 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Pir_g18240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g23716 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g63952 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g17683 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ppi_g10839 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39720 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005176 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019911 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Sam_g07697 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sam_g35235 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Smo121181 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Smo412609 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Smo438576 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Smo441685 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Smo96631 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Solyc02g067700.1.1 ATL3, Solyc02g067700 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc02g068415.1.1 RHA3A, Solyc02g068415 RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc03g114090.1.1 Solyc03g114090 RING-H2-class E3 ligase 0.08 OrthoFinder output from all 47 species
Solyc03g114190.1.1 Solyc03g114190 RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g009487.1.1 Solyc10g009487 RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g14932 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g24937 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Tin_g09773 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.04 OrthoFinder output from all 47 species
Tin_g09893 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.04 OrthoFinder output from all 47 species
Tin_g12610 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.04 OrthoFinder output from all 47 species
Tin_g26609 XERICO not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e014302_P001 Zm00001e014302 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e017959_P001 Zm00001e017959 RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e039314_P001 Zm00001e039314 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 115 158
No external refs found!