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  5. LOC_Os02g14900.1

LOC_Os02g14900.1 (GSL04, atgsl4, gsl04,...)


Aliases : GSL04, atgsl4, gsl04, ATGSL04, LOC_Os02g14900

Description : callose synthase


Gene families : OG0000112 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g14900.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00081p00020880 evm_27.TU.AmTr_v1... Callose synthase 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00111p00150590 ATGSL08, ATGSL8,... Cell wall.callose.callose synthase 0.02 OrthoFinder output from all 47 species
AT2G13680 GLS2, ATGSL02, CALS5 callose synthase 5 0.05 OrthoFinder output from all 47 species
Als_g33737 GSL5, PMR4,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49570 gsl12, ATGSL12 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g13887 ATGSL10, gsl10, CALS9 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0020.g015340 ATGSL10, gsl10, CALS9 EC_2.4 glycosyltransferase & original description: CDS=243-5864 0.03 OrthoFinder output from all 47 species
Cba_g73801 GLS2, ATGSL02, CALS5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03510 GSL5, PMR4,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07969 GLS2, ATGSL02, CALS5 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000622001 GSL04, atgsl4,... Cell wall.callose.callose synthase 0.06 OrthoFinder output from all 47 species
GSVIVT01001361001 GSL06, ATGSL06,... Cell wall.callose.callose synthase 0.03 OrthoFinder output from all 47 species
GSVIVT01025362001 gsl12, ATGSL12 Cell wall.callose.callose synthase 0.04 OrthoFinder output from all 47 species
Gb_06219 gsl12, ATGSL12 callose synthase 0.02 OrthoFinder output from all 47 species
Lfl_g06768 gsl12, ATGSL12 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12587 GLS2, ATGSL02, CALS5 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g24615 ATGSL10, gsl10, CALS9 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp3g24830.1 GLS2, ATGSL02, CALS5 callose synthase 0.02 OrthoFinder output from all 47 species
Nbi_g03219 ATGSL01, GSL01,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g54107 ATGSL08, ATGSL8,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53395 ATGSL01, GSL01,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g29251 No alias EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g111570.4.1 ATGSL08, ATGSL8,... callose synthase 0.04 OrthoFinder output from all 47 species
Solyc11g005980.3.1 GLS2, ATGSL02,... callose synthase 0.05 OrthoFinder output from all 47 species
Spa_g39785 ATGSL08, ATGSL8,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014323_P001 GSL04, atgsl4,... callose synthase 0.04 OrthoFinder output from all 47 species
Zm00001e016291_P004 gsl12, ATGSL12,... Callose synthase 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e020771_P004 GSL7, ATGSL07,... callose synthase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEA Interproscan
MF GO:0003843 1,3-beta-D-glucan synthase activity IEA Interproscan
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003440 Glyco_trans_48 586 1271
IPR026899 FKS1-like_dom1 57 89
IPR026899 FKS1-like_dom1 93 123
No external refs found!