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  5. LOC_Os02g14860.1

LOC_Os02g14860.1 (PFD6, LOC_Os02g14860)


Aliases : PFD6, LOC_Os02g14860

Description : component PFD6 of Prefoldin co-chaperone complex


Gene families : OG0005135 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005135_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g14860.1

Target Alias Description ECC score Gene Family Method Actions
AT1G29990 PFD6 prefoldin 6 0.11 OrthoFinder output from all 47 species
Aspi01Gene22320.t1 PFD6, Aspi01Gene22320 component *(PFD6) of Prefoldin co-chaperone complex &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000912.18 PFD6 No description available 0.03 OrthoFinder output from all 47 species
Cre12.g502750 PFD6 Cytoskeleton.actin and tubulin folding.Prefoldin... 0.1 OrthoFinder output from all 47 species
Dcu_g14108 PFD6 component *(PFD6) of Prefoldin co-chaperone complex &... 0.05 OrthoFinder output from all 47 species
Ehy_g01946 PFD6 component *(PFD6) of Prefoldin co-chaperone complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01021444001 PFD6 Cytoskeleton.actin and tubulin folding.Prefoldin... 0.03 OrthoFinder output from all 47 species
Len_g29267 PFD6 component *(PFD6) of Prefoldin co-chaperone complex &... 0.02 OrthoFinder output from all 47 species
Mp3g06090.1 PFD6 component PFD6 of Prefoldin co-chaperone complex 0.09 OrthoFinder output from all 47 species
Nbi_g10695 PFD6 component *(PFD6) of Prefoldin co-chaperone complex &... 0.04 OrthoFinder output from all 47 species
Ore_g25178 PFD6 component *(PFD6) of Prefoldin co-chaperone complex &... 0.03 OrthoFinder output from all 47 species
Solyc08g016420.3.1 PFD6, Solyc08g016420 component PFD6 of Prefoldin co-chaperone complex 0.03 OrthoFinder output from all 47 species
Tin_g00149 PFD6 component *(PFD6) of Prefoldin co-chaperone complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e014327_P003 PFD6, Zm00001e014327 component PFD6 of Prefoldin co-chaperone complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA Interproscan
CC GO:0016272 prefoldin complex IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007023 post-chaperonin tubulin folding pathway IEP HCCA
BP GO:0007029 endoplasmic reticulum organization IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002777 PFD_beta-like 24 126
No external refs found!