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  5. LOC_Os02g11030.1

LOC_Os02g11030.1 (LOC_Os02g11030)


Aliases : LOC_Os02g11030

Description : component mtRPL19 of large ribosomal subunit proteome


Gene families : OG0002345 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002345_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: LOC_Os02g11030.1
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AT5G11750 No alias Ribosomal protein L19 family protein 0.06 OrthoFinder output from all 47 species
Aop_g12532 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Azfi_s0038.g026285 No alias not classified & original description: CDS=236-784 0.04 OrthoFinder output from all 47 species
Cre07.g322500 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre17.g734450 No alias 50S ribosomal protein L19, chloroplastic OS=Mesostigma viride 0.02 OrthoFinder output from all 47 species
Dac_g02581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007636001 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Msp_g30129 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g02683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c24_12530V3.1 Pp3c24_12530 Ribosomal protein L19 family protein 0.02 OrthoFinder output from all 47 species
Sam_g47780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e021865_P001 Zm00001e021865 component mtRPL19 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001857 Ribosomal_L19 123 218
No external refs found!