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  5. LOC_Os02g10540.1

LOC_Os02g10540.1 (LOC_Os02g10540)


Aliases : LOC_Os02g10540

Description : component mtRPL7/L12 of large ribosomal subunit proteome


Gene families : OG0000926 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000926_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g10540.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AT1G70190 No alias Ribosomal protein L7/L12, oligomerisation;Ribosomal... 0.06 OrthoFinder output from all 47 species
AT3G06040 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.08 OrthoFinder output from all 47 species
AT4G36420 No alias Ribosomal protein L12 family protein 0.06 OrthoFinder output from all 47 species
Ceric.34G065900.1 Ceric.34G065900 not classified & original description: pacid=50622739... 0.03 OrthoFinder output from all 47 species
Cre06.g293700 No alias Protein biosynthesis.organelle translation... 0.01 OrthoFinder output from all 47 species
Gb_16973 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Gb_26365 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Lfl_g35843 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_137800g0010 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
Mp1g23110.1 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Sam_g18974 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g25875 No alias component *(bL12m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Sam_g27095 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27096 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo49023 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Solyc02g031970.1.1 Solyc02g031970 component mtRPL7/L12 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Solyc02g092300.1.1 Solyc02g092300 component mtRPL7/L12 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Solyc11g071530.1.1 Solyc11g071530 component mtRPL7/L12 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Zm00001e025012_P001 Zm00001e025012 component mtRPL7/L12 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR013823 Ribosomal_L7/L12_C 126 189
No external refs found!