LOC_Os02g10260.1 (OEP80, EMB213, TOC75,...)


Aliases : OEP80, EMB213, TOC75, ATOEP80, LOC_Os02g10260

Description : Outer envelope protein 80, chloroplastic OS=Oryza sativa subsp. japonica (sp|q6h7m7|oep80_orysj : 1087.0)


Gene families : OG0004180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004180_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g10260.1
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00244130 OEP80, EMB213,... Outer envelope protein 80, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dcu_g04034 OEP80, EMB213,... chloroplast insertion factor for beta-barrel membrane... 0.03 OrthoFinder output from all 47 species
MA_10426842g0010 OEP80, EMB213,... Outer envelope protein 80, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp1g17250.1 OEP80, EMB213,... Outer envelope protein 80, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g35276 OEP80, EMB213,... chloroplast insertion factor for beta-barrel membrane... 0.02 OrthoFinder output from all 47 species
Zm00001e014078_P003 OEP80, EMB213,... Outer envelope protein 80, chloroplastic OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0019867 outer membrane IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR010827 BamA/TamA_POTRA 267 328
IPR000184 Bac_surfAg_D15 361 664
No external refs found!