LOC_Os02g09790.1 (RPM1, RPS3, LOC_Os02g09790)

Aliases : RPM1, RPS3, LOC_Os02g09790

Description : Disease resistance protein RPM1 OS=Arabidopsis thaliana (sp|q39214|rpm1_arath : 348.0)

Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os02g09790.1
Cluster	HCCA: Cluster_102

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01024096001	No alias	Putative disease resistance protein At1g59780...	0.03	OrthoFinder output from all 47 species
Gb_26463	No alias	Putative disease resistance protein RGA4 OS=Solanum...	0.02	OrthoFinder output from all 47 species
LOC_Os01g41890.1	LOC_Os01g41890	no description available(sp\|f7j0n2\|rga5r_orysj : 246.0)	0.03	OrthoFinder output from all 47 species
LOC_Os04g14220.2	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
LOC_Os07g27370.1	LOC_Os07g27370	no description available(sp\|f7j0n2\|rga5r_orysj : 424.0)	0.05	OrthoFinder output from all 47 species
LOC_Os08g09430.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os11g12340.2	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os11g12350.1	LOC_Os11g12350	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
LOC_Os11g17110.1	LOC_Os11g17110	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os11g17330.1	LOC_Os11g17330	no description available(sp\|q2r8l1\|rga5s_orysj : 391.0)	0.03	OrthoFinder output from all 47 species
Solyc04g025820.1.1	RPP13, Solyc04g025820	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008171	O-methyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	177	420
IPR041118	Rx_N	16	100
IPR001611	Leu-rich_rpt	602	653

External Links

No external refs found!