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  5. LOC_Os02g07980.1

LOC_Os02g07980.1 (LOC_Os02g07980)


Aliases : LOC_Os02g07980

Description : no hits & (original description: none)


Gene families : OG0001798 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001798_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g07980.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00248000 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Ceric.37G032200.1 Ceric.37G032200 not classified & original description: pacid=50615863... 0.03 OrthoFinder output from all 47 species
Gb_36092 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g00098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g18890.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g00145 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013425 No alias not classified & original description: CDS=52-420 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0008535 respiratory chain complex IV assembly IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
BP GO:0033617 mitochondrial cytochrome c oxidase assembly IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR008590 TMEM_230/134 29 101
No external refs found!