LOC_Os02g06960.1 (LOC_Os02g06960)


Aliases : LOC_Os02g06960

Description : no hits & (original description: none)


Gene families : OG0001961 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001961_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g06960.1
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AT1G79060 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 OrthoFinder output from all 47 species
AT3G19200 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
AT3G50640 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
AT5G19340 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
AT5G66800 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
Ala_g27098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40600 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17811 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g09049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020462001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01022142001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os02g52490.2 LOC_Os02g52490 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g46250.1 LOC_Os06g46250 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g03308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g00615 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04362 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14274 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017462 No alias not classified & original description: CDS=1-2376 0.03 OrthoFinder output from all 47 species
Solyc01g108170.3.1 Solyc01g108170 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc02g090720.3.1 Solyc02g090720 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g054280.1.1 Solyc06g054280 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc07g066350.1.1 Solyc07g066350 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g005610.2.1 Solyc10g005610 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e009954_P001 Zm00001e009954 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e013706_P001 Zm00001e013706 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e015934_P003 Zm00001e015934 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e018096_P001 Zm00001e018096 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e023821_P002 Zm00001e023821 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e025161_P001 Zm00001e025161 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e030336_P001 Zm00001e030336 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e034353_P001 Zm00001e034353 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!