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  5. LOC_Os02g06840.1

LOC_Os02g06840.1 (LOC_Os02g06840)


Aliases : LOC_Os02g06840

Description : AGP beta-1,3-galactosyltransferase


Gene families : OG0000384 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000384_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g06840.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00084p00079370 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT4G26940 No alias Galactosyltransferase family protein 0.03 OrthoFinder output from all 47 species
Adi_g011619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07471 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.03 OrthoFinder output from all 47 species
Ala_g13205 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene32349.t1 Aspi01Gene32349 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019685001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
Len_g17120 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.02 OrthoFinder output from all 47 species
Len_g18249 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g06965 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g24861 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.02 OrthoFinder output from all 47 species
Pir_g16430 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.02 OrthoFinder output from all 47 species
Pir_g17834 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006092 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.04 OrthoFinder output from all 47 species
Sam_g18798 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.03 OrthoFinder output from all 47 species
Solyc07g052320.3.1 Solyc07g052320 AGP beta-1,3-galactosyltransferase 0.04 OrthoFinder output from all 47 species
Tin_g24594 No alias beta-1,3-galactosyltransferase *(B3GALT) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e025169_P001 Zm00001e025169 AGP beta-1,3-galactosyltransferase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR002659 Glyco_trans_31 145 342
IPR025298 DUF4094 14 105
No external refs found!