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  5. LOC_Os02g06592.1

LOC_Os02g06592.1 (BTAF1, RGD3, CHA16,...)


Aliases : BTAF1, RGD3, CHA16, ATBTAF1, CHR16, LOC_Os02g06592

Description : chromatin remodeling factor (Mot1). TATA box-binding protein-associated factor (MOT1)


Gene families : OG0004296 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g06592.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00169400 BTAF1, RGD3,... RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
AT3G54280 BTAF1, RGD3,... DNA binding;ATP binding;nucleic acid... 0.03 OrthoFinder output from all 47 species
Als_g16472 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene60693.t2 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.01 OrthoFinder output from all 47 species
Dcu_g03219 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.02 OrthoFinder output from all 47 species
Dde_g14787 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.02 OrthoFinder output from all 47 species
MA_79681g0010 BTAF1, RGD3,... chromatin remodeling factor (Mot1). TATA box-binding... 0.02 OrthoFinder output from all 47 species
Pir_g09833 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.03 OrthoFinder output from all 47 species
Sam_g29302 No alias TATA box-binding protein-associated factor *(MOT1) &... 0.04 OrthoFinder output from all 47 species
Solyc08g074510.1.1 BTAF1, RGD3,... TATA-binding protein-associated factor BTAF1... 0.03 OrthoFinder output from all 47 species
Solyc08g074520.2.1 BTAF1, RGD3,... TATA-binding protein-associated factor BTAF1... 0.02 OrthoFinder output from all 47 species
Zm00001e032564_P001 BTAF1, RGD3,... chromatin remodeling factor (Mot1). TATA box-binding... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
InterPro domains Description Start Stop
IPR000330 SNF2_N 1 284
IPR001650 Helicase_C 345 445
No external refs found!