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  5. LOC_Os02g04540.1

LOC_Os02g04540.1 (LRX1, LOC_Os02g04540)


Aliases : LRX1, LOC_Os02g04540

Description : LRR-domain extensin


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g04540.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.04 OrthoFinder output from all 47 species
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AT1G49490 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT1G49750 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.03 OrthoFinder output from all 47 species
AT4G13340 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.07 OrthoFinder output from all 47 species
Adi_g016368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g107400 LRX2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18679 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g37061 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g03898 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04035 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03749 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03771 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39238 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05958 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13705 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18015 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11490 No alias LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g18349 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21090 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21238 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01034.t1 LRX2, Aspi01Gene01034 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene09207.t1 Aspi01Gene09207 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59063.t1 Aspi01Gene59063 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000464 No alias LRR-domain extensin & original description: CDS=1-1719 0.05 OrthoFinder output from all 47 species
Azfi_s0008.g011627 LRX2 LRR-domain extensin & original description: CDS=1-1815 0.05 OrthoFinder output from all 47 species
Azfi_s0013.g013083 LRX2 not classified & original description: CDS=228-2453 0.05 OrthoFinder output from all 47 species
Azfi_s0114.g046029 No alias LRR-domain extensin & original description: CDS=1-1872 0.03 OrthoFinder output from all 47 species
Ceric.15G053400.1 Ceric.15G053400 not classified & original description: pacid=50640042... 0.05 OrthoFinder output from all 47 species
Ceric.17G055900.1 Ceric.17G055900 LRR-domain extensin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.24G073600.1 LRX2, Ceric.24G073600 LRR-domain extensin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G025000.1 Ceric.32G025000 LRR-domain extensin & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g15319 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36028 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g13236 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15033 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g25878 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18979 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009442001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01015276001 No alias Leucine-rich repeat extensin-like protein 4... 0.03 OrthoFinder output from all 47 species
GSVIVT01020574001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01031700001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
Gb_10910 LRX2 LRR-domain extensin 0.05 OrthoFinder output from all 47 species
LOC_Os01g41120.1 LOC_Os01g41120 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
LOC_Os02g40260.1 LOC_Os02g40260 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os04g42620.1 LOC_Os04g42620 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os05g09640.1 LOC_Os05g09640 Leucine-rich repeat extensin-like protein 4... 0.05 OrthoFinder output from all 47 species
Len_g28005 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Len_g38364 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
MA_100985g0010 LRX2 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Mp2g25390.1 No alias Leucine-rich repeat extensin-like protein 4... 0.02 OrthoFinder output from all 47 species
Mp8g04500.1 No alias Leucine-rich repeat extensin-like protein 1... 0.02 OrthoFinder output from all 47 species
Msp_g07695 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32219 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g39205 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05430 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16811 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03283 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g11851 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g30505 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40535 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05847 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10314 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31622 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011513 No alias LRR-domain extensin & original description: CDS=1-1296 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012064 No alias LRR-domain extensin & original description: CDS=1-1452 0.03 OrthoFinder output from all 47 species
Smo81544 LRX2 Cell wall.cell wall proteins.hydroxyproline-rich... 0.06 OrthoFinder output from all 47 species
Solyc05g026240.3.1 Solyc05g026240 Leucine-rich repeat extensin-like protein 4... 0.04 OrthoFinder output from all 47 species
Solyc09g082530.3.1 Solyc09g082530 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Solyc10g050110.1.1 Solyc10g050110 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Spa_g05733 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06078 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13067 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g27071 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33020 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37100 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53147 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005974_P001 Zm00001e005974 LRR-domain extensin 0.06 OrthoFinder output from all 47 species
Zm00001e007641_P001 Zm00001e007641 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e011874_P001 Zm00001e011874 LRR-domain extensin 0.05 OrthoFinder output from all 47 species
Zm00001e013618_P001 LRX1, Zm00001e013618 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Zm00001e015109_P001 Zm00001e015109 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e026840_P001 Zm00001e026840 LRR-domain extensin 0.05 OrthoFinder output from all 47 species
Zm00001e030216_P001 LRX2, Zm00001e030216 LRR-domain extensin 0.07 OrthoFinder output from all 47 species
Zm00001e031217_P001 Zm00001e031217 Leucine-rich repeat extensin-like protein 4... 0.06 OrthoFinder output from all 47 species
Zm00001e031241_P001 Zm00001e031241 LRR-domain extensin 0.06 OrthoFinder output from all 47 species
Zm00001e041184_P001 Zm00001e041184 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 134 192
No external refs found!