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  5. LOC_Os02g04080.1

LOC_Os02g04080.1 (TTN7, SMC3, LOC_Os02g04080)


Aliases : TTN7, SMC3, LOC_Os02g04080

Description : component SMC3/TTN7 of cohesin regulator complex


Gene families : OG0003981 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003981_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g04080.1
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00198810 TTN7, SMC3,... Cell cycle.mitosis and meiosis.sister chromatid... 0.02 OrthoFinder output from all 47 species
Aob_g19956 TTN7, SMC3 component *(SMC3/TTN7) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
Cba_g02732 TTN7, SMC3 component *(SMC3/TTN7) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000711.46 TTN7, SMC3 Structural maintenance of chromosomes protein 3... 0.01 OrthoFinder output from all 47 species
Lfl_g04244 TTN7, SMC3 component *(SMC3/TTN7) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Mp5g09700.1 TTN7, SMC3 component SMC3/TTN7 of cohesin regulator complex 0.02 OrthoFinder output from all 47 species
Sam_g36147 No alias component *(SMC3/TTN7) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005694 chromosome IEA Interproscan
BP GO:0051276 chromosome organization IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010935 SMC_hinge 438 551
No external refs found!