LOC_Os01g70780.1


Description : component ATG18 of autophagosome ATG9-2-18 membrane shuttling complex


Gene families : OG_01_0001600 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001600_tree ,
OG_02_0001405 (LandPlants) Phylogenetic Tree(s): OG_02_0001405_tree ,
OG_03_0001795 (SeedPlants) Phylogenetic Tree(s): OG_03_0001795_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g70780.1
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AT2G40810 ATG18C, ATATG18C homolog of yeast autophagy 18C 0.02 Archaeplastida
AT3G62770 AtATG18a Transducin/WD40 repeat-like superfamily protein 0.05 Archaeplastida
GSVIVT01010945001 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.03 Archaeplastida
MA_205985g0010 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 Archaeplastida
Pp3c5_5710V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Archaeplastida
Smo171378 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.02 Archaeplastida
Zm00001e016794_P001 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.06 Archaeplastida
AT2G40810 ATG18C, ATATG18C homolog of yeast autophagy 18C 0.02 LandPlants
AT3G62770 AtATG18a Transducin/WD40 repeat-like superfamily protein 0.02 LandPlants
GSVIVT01010945001 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.03 LandPlants
Gb_28411 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 LandPlants
MA_205985g0010 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 LandPlants
Pp3c5_5710V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.04 LandPlants
Smo171378 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.02 LandPlants
Solyc01g099400.4.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 LandPlants
Zm00001e016794_P001 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 LandPlants
AT2G40810 ATG18C, ATATG18C homolog of yeast autophagy 18C 0.02 SeedPlants
AT3G62770 AtATG18a Transducin/WD40 repeat-like superfamily protein 0.02 SeedPlants
GSVIVT01010945001 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.03 SeedPlants
Solyc01g099400.4.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 SeedPlants
Zm00001e016794_P001 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 274 302
IPR001680 WD40_repeat 320 351
No external refs found!