LOC_Os02g03294.1 (CYCP4;1, LOC_Os02g03294)

Aliases : CYCP4;1, LOC_Os02g03294

Description : cyclin (CYCP)

Gene families : OG0000303 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000303_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os02g03294.1
Cluster	HCCA: Cluster_104

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00106p00124350	cycp3;1,...	Cell cycle.regulation.cyclins.CYCP-type cyclin	0.03	OrthoFinder output from all 47 species
AT2G44740	CYCP4;1	cyclin p4;1	0.05	OrthoFinder output from all 47 species
AT2G45080	cycp3;1	cyclin p3;1	0.01	OrthoFinder output from all 47 species
AT3G05327	No alias	Cyclin family protein	0.04	OrthoFinder output from all 47 species
AT3G60550	CYCP3;2	cyclin p3;2	0.03	OrthoFinder output from all 47 species
AT3G63120	CYCP1;1	cyclin p1;1	0.03	OrthoFinder output from all 47 species
AT5G61650	CYCP4;2, CYCP4	CYCLIN P4;2	0.03	OrthoFinder output from all 47 species
Adi_g006736	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Aev_g18881	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Ala_g03971	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Ala_g15122	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Ala_g16985	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Ala_g25698	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Ala_g36160	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Als_g02320	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Als_g21897	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Aob_g07900	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Aop_g00597	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.05	OrthoFinder output from all 47 species
Aop_g05309	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Aop_g05761	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Aop_g11744	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Aop_g14532	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.05	OrthoFinder output from all 47 species
Aspi01Gene04191.t1	CYCP2;1, Aspi01Gene04191	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene30001.t1	CYCP4;1, Aspi01Gene30001	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene38820.t1	CYCP4;1, Aspi01Gene38820	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene38824.t1	CYCP4;1, Aspi01Gene38824	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene48169.t1	CYCP2;1, Aspi01Gene48169	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene51759.t1	CYCP4;1, Aspi01Gene51759	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene58408.t1	CYCP2;1, Aspi01Gene58408	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Azfi_s0060.g034840	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.06	OrthoFinder output from all 47 species
Azfi_s0084.g039008	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Cba_g07393	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Cba_g10117	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Ceric.07G089000.1	CYCP3;2, Ceric.07G089000	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.05	OrthoFinder output from all 47 species
Ceric.07G089100.1	CYCP3;2, Ceric.07G089100	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Ceric.10G034800.1	CYCP2;1, Ceric.10G034800	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Ceric.17G024900.1	CYCP4;1, Ceric.17G024900	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Ceric.31G015200.1	CYCP3;2, Ceric.31G015200	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Dac_g01502	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Dac_g02043	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.05	OrthoFinder output from all 47 species
Dac_g04053	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Dac_g21403	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Dac_g21404	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.05	OrthoFinder output from all 47 species
Dcu_g07480	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Dcu_g42276	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Dde_g02131	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Dde_g07807	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Dde_g15368	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Ehy_g05568	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Ehy_g06469	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Ehy_g11009	CYCP4;2, CYCP4	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01000045001	No alias	Cell cycle.regulation.cyclins.CYCP-type cyclin	0.03	OrthoFinder output from all 47 species
GSVIVT01018304001	CYCP4;1	Cell cycle.regulation.cyclins.CYCP-type cyclin	0.03	OrthoFinder output from all 47 species
Gb_27223	CYCP3;2	cyclin (CYCP)	0.06	OrthoFinder output from all 47 species
Gb_39399	CYCP4;1	cyclin (CYCP)	0.03	OrthoFinder output from all 47 species
LOC_Os04g46660.1	cycp3;1, LOC_Os04g46660	cyclin (CYCP)	0.06	OrthoFinder output from all 47 species
LOC_Os10g41430.1	CYCP4;1, LOC_Os10g41430	cyclin (CYCP)	0.04	OrthoFinder output from all 47 species
Len_g08941	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Lfl_g16742	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
MA_10430367g0010	CYCP2;1	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_10435168g0020	CYCP3;2	cyclin (CYCP)	0.03	OrthoFinder output from all 47 species
MA_57087g0010	cycp3;1	cyclin (CYCP)	0.04	OrthoFinder output from all 47 species
Msp_g00510	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Msp_g05627	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Ore_g08217	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Ore_g22726	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.08	OrthoFinder output from all 47 species
Ore_g24433	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Ore_g28947	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.08	OrthoFinder output from all 47 species
Pir_g09300	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Pir_g16206	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Pnu_g10155	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Ppi_g00643	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.05	OrthoFinder output from all 47 species
Ppi_g07325	CYCP3;2	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.05	OrthoFinder output from all 47 species
Ppi_g13236	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.06	OrthoFinder output from all 47 species
Ppi_g29737	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Ppi_g62553	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007745	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s0217.g026066	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Sam_g05185	No alias	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Sam_g12163	No alias	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Sam_g16477	No alias	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Solyc01g089850.4.1	CYCP4;1, Solyc01g089850	cyclin (CYCP)	0.04	OrthoFinder output from all 47 species
Solyc01g090800.3.1	CYCP3;2, Solyc01g090800	cyclin (CYCP)	0.02	OrthoFinder output from all 47 species
Solyc03g093790.3.1	CYCP4;1, Solyc03g093790	cyclin (CYCP)	0.06	OrthoFinder output from all 47 species
Solyc07g052610.3.1	CYCP2;1, Solyc07g052610	cyclin (CYCP)	0.04	OrthoFinder output from all 47 species
Spa_g03908	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Spa_g16879	CYCP3;2	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Spa_g17025	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Spa_g39740	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Spa_g47429	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Tin_g19076	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Tin_g27209	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.06	OrthoFinder output from all 47 species
Tin_g28471	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Zm00001e007314_P001	cycp3;1, Zm00001e007314	cyclin (CYCP)	0.07	OrthoFinder output from all 47 species
Zm00001e007371_P002	CYCP4;3, Zm00001e007371	cyclin (CYCP)	0.03	OrthoFinder output from all 47 species
Zm00001e015290_P001	CYCP4;3, Zm00001e015290	cyclin (CYCP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEA	Interproscan
BP	GO:0001932	regulation of protein phosphorylation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0019900	kinase binding	None	Extended
MF	GO:0019901	protein kinase binding	IEA	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0042325	regulation of phosphorylation	None	Extended
BP	GO:0043549	regulation of kinase activity	None	Extended
BP	GO:0045859	regulation of protein kinase activity	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051338	regulation of transferase activity	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071900	regulation of protein serine/threonine kinase activity	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009733	response to auxin	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013922	Cyclin_PHO80-like	48	175

External Links

No external refs found!

LOC_Os02g03294.1 (CYCP4;1, LOC_Os02g03294)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation