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Aliases : AT-GT2, GT2, LOC_Os02g01380
Description : transcription factor (Trihelix)
Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os02g01380.1 | |
| Cluster | HCCA: Cluster_81 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00041p00147950 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.Trihelix... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G33240 | AT-GTL1, GTL1, AT-GTL2 | GT-2-like 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT1G76880 | No alias | Duplicated homeodomain-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g06719 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g08051 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g12605 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g28820 | AT-GTL1, GTL1, AT-GTL2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g27632 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g34081 | AT-GTL1, GTL1, AT-GTL2 | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g40404 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g50192 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g57836 | No alias | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g05344 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g14934 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g22030 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene07378.t2 | AT-GT2, GT2,... | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0305.g063935 | AT-GT2, GT2 | not classified & original description: CDS=293-1360 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0506.g073955 | AT-GT2, GT2 | Trihelix-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g72625 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.03G031000.1 | Ceric.03G031000 | Trihelix-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.36G000200.1 | Ceric.36G000200 | Trihelix-type transcription factor & original... | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g03068 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g39560 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g39107 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g04858 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g24833 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g27401 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01035465001 | No alias | RNA biosynthesis.transcriptional activation.Trihelix... | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os03g02240.1 | AT-GT2, GT2,... | transcription factor (Trihelix) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os10g37240.4 | LOC_Os10g37240 | Trihelix transcription factor GT-2 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g07748 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g19098 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10427500g0020 | No alias | transcription factor (Trihelix) | 0.04 | OrthoFinder output from all 47 species | |
| MA_10427500g0030 | No alias | Trihelix transcription factor GTL1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10433499g0020 | AT-GT2, GT2 | transcription factor (Trihelix) | 0.04 | OrthoFinder output from all 47 species | |
| MA_47951g0010 | No alias | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g10229 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g01302 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g60651 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0084.g018240 | AT-GT2, GT2 | Trihelix-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0130.g022074 | AT-GT2, GT2 | Trihelix-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0157.g023745 | No alias | Trihelix-type transcription factor & original... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g06396 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g49398 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000092_P003 | AT-GTL1, GTL1,... | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e004364_P002 | Zm00001e004364 | transcription factor (Trihelix) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e007383_P001 | Zm00001e007383 | transcription factor (Trihelix) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e012540_P001 | Zm00001e012540 | transcription factor (Trihelix) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
| BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0030001 | metal ion transport | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |