LOC_Os01g74370.1 (LOC_Os01g74370)


Aliases : LOC_Os01g74370

Description : no hits & (original description: none)


Gene families : OG0001011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001011_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g74370.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00133150 evm_27.TU.AmTr_v1... Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G05577 No alias Domain of unknown function (DUF966) 0.03 OrthoFinder output from all 47 species
AT3G46110 No alias Domain of unknown function (DUF966) 0.04 OrthoFinder output from all 47 species
AT5G10150 No alias Domain of unknown function (DUF966) 0.02 OrthoFinder output from all 47 species
Aev_g07884 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12604 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18845.t1 Aspi01Gene18845 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19661.t1 Aspi01Gene19661 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25837.t1 Aspi01Gene25837 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34495.t1 Aspi01Gene34495 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene53127.t1 Aspi01Gene53127 A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g029962 No alias not classified & original description: CDS=1-2628 0.02 OrthoFinder output from all 47 species
Azfi_s0116.g046319 No alias not classified & original description: CDS=53-2212 0.03 OrthoFinder output from all 47 species
Ceric.03G030000.1 Ceric.03G030000 not classified & original description: pacid=50571333... 0.04 OrthoFinder output from all 47 species
Ceric.13G026100.1 Ceric.13G026100 not classified & original description: pacid=50635606... 0.03 OrthoFinder output from all 47 species
Ehy_g06611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016603001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01031468001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01031469001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_35177 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g39750.1 LOC_Os09g39750 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g18739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_40202g0010 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g48516 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008511 No alias not classified & original description: CDS=25-1092 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010278 No alias not classified & original description: CDS=116-3175 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0178.g024671 No alias not classified & original description: CDS=409-2136 0.04 OrthoFinder output from all 47 species
Sam_g50494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo412562 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc06g030470.4.1 Solyc06g030470 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc06g075690.3.1 Solyc06g075690 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Spa_g49772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005317_P002 Zm00001e005317 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e019641_P005 Zm00001e019641 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e027133_P001 Zm00001e027133 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e028781_P001 Zm00001e028781 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR010369 SOK 166 304
IPR010369 SOK 39 144
No external refs found!