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  5. LOC_Os01g74020.1

LOC_Os01g74020.1 (LUX, PCL1, LOC_Os01g74020)


Aliases : LUX, PCL1, LOC_Os01g74020

Description : component LUX of circadian clock Evening complex (EC)


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g74020.1

Target Alias Description ECC score Gene Family Method Actions
AT1G67710 ARR11 response regulator 11 0.03 OrthoFinder output from all 47 species
AT2G40970 MYBC1 Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g08573 ARR11 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01816 ARR11 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58607.t1 MYBC1, Aspi01Gene58607 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g60880 ARR11 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.31G008400.1 Ceric.31G008400 subgroup ARR-B transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01024916001 LUX, PCL1 Multi-process regulation.circadian clock.evening element... 0.03 OrthoFinder output from all 47 species
Lfl_g09396 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g21220.1 LUX, PCL1 component LUX of circadian clock Evening complex (EC) 0.03 OrthoFinder output from all 47 species
Msp_g24147 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g26712 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11087 ARR11 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g005680.4.1 LUX, PCL1, Solyc06g005680 component LUX of circadian clock Evening complex (EC) 0.03 OrthoFinder output from all 47 species
Solyc06g076350.3.1 Solyc06g076350 component LUX of circadian clock Evening complex (EC) 0.03 OrthoFinder output from all 47 species
Solyc11g072330.2.1 RR12, ARR12,... Two-component response regulator ARR2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e018507_P001 LUX, PCL1, Zm00001e018507 component LUX of circadian clock Evening complex (EC) 0.03 OrthoFinder output from all 47 species
Zm00001e019299_P002 Zm00001e019299 Transcription factor PCL1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Zm00001e028258_P001 Zm00001e028258 Transcription factor PCL1 OS=Oryza sativa subsp.... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 122 170
No external refs found!