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Aliases : LOC_Os01g73620
Description : component ADA3 of SAGA transcription co-activator complex
Gene families : OG0002109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002109_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os01g73620.1 | |
| Cluster | HCCA: Cluster_58 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G22450 | No alias | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g016461 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g29931 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g05137 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g21244 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g29245 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g49585 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g10990 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g10991 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0021.g015784 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.03G067900.1 | Ceric.03G067900 | component *(ADA3) of SAGA transcription co-activator... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.34G015100.1 | Ceric.34G015100 | component *(ADA3) of SAGA transcription co-activator... | 0.1 | OrthoFinder output from all 47 species | |
| Dac_g32253 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g46147 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.07 | OrthoFinder output from all 47 species | |
| Ehy_g12120 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015158001 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.12 | OrthoFinder output from all 47 species | |
| GSVIVT01036136001 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g10698 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.06 | OrthoFinder output from all 47 species | |
| Len_g35259 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g10282 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g27993 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| MA_107341g0010 | No alias | component ADA3 of SAGA transcription co-activator complex | 0.06 | OrthoFinder output from all 47 species | |
| Mp1g06630.1 | No alias | component ADA3 of SAGA transcription co-activator complex | 0.09 | OrthoFinder output from all 47 species | |
| Msp_g14668 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g18247 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g18819 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g13632 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g43188 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g17934 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0037.g011817 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g48948 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Smo407119 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.08 | OrthoFinder output from all 47 species | |
| Solyc07g040980.3.1 | Solyc07g040980 | component ADA3 of SAGA transcription co-activator complex | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g006960.2.1 | Solyc11g006960 | component ADA3 of SAGA transcription co-activator complex | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g26204 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e027665_P001 | Zm00001e027665 | component ADA3 of SAGA transcription co-activator complex | 0.11 | OrthoFinder output from all 47 species | |
| Zm00001e029688_P001 | Zm00001e029688 | component ADA3 of SAGA transcription co-activator complex | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
| MF | GO:0042393 | histone binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |