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  5. LOC_Os01g72950.1

LOC_Os01g72950.1 (NDH-O, LOC_Os01g72950)


Aliases : NDH-O, LOC_Os01g72950

Description : component NdhO of NDH subcomplex A


Gene families : OG0008903 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008903_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g72950.1
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AT1G74880 NDH-O NAD(P)H:plastoquinone dehydrogenase complex subunit O 0.04 OrthoFinder output from all 47 species
Aev_g37955 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Ala_g10682 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Aop_g06458 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene19724.t1 NDH-O, Aspi01Gene19724 component *(NdhO) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Cba_g21960 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Ceric.1Z011100.1 NDH-O, Ceric.1Z011100 component *(NdhO) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Dac_g00125 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Dcu_g10142 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Dde_g00121 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01026485001 NDH-O Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.13 OrthoFinder output from all 47 species
Gb_30052 NDH-O component NdhO of NDH subcomplex A 0.07 OrthoFinder output from all 47 species
Len_g10034 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.02 OrthoFinder output from all 47 species
Lfl_g16986 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.06 OrthoFinder output from all 47 species
Mp4g21490.1 NDH-O component NdhO of NDH subcomplex A 0.03 OrthoFinder output from all 47 species
Msp_g02956 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Ore_g26404 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Ppi_g52142 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018845 NDH-O assembly factor involved in RuBisCo assembly *(RbcX) &... 0.02 OrthoFinder output from all 47 species
Solyc11g006020.2.1 NDH-O, Solyc11g006020 component NdhO of NDH subcomplex A 0.08 OrthoFinder output from all 47 species
Spa_g10342 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Tin_g45495 NDH-O component *(NdhO) of NDH subcomplex A & original... 0.06 OrthoFinder output from all 47 species
Zm00001e028287_P002 NDH-O, Zm00001e028287 component NdhO of NDH subcomplex A 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IEA Interproscan
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR020905 NdhO 81 155
No external refs found!