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Aliases : LRP1, LOC_Os01g72490
Description : transcription factor (SRS)
Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os01g72490.1 | |
| Cluster | HCCA: Cluster_57 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00063p00161200 | LRP1,... | RNA biosynthesis.transcriptional activation.SRS... | 0.07 | OrthoFinder output from all 47 species | |
| AT1G19790 | SRS7 | SHI-related sequence 7 | 0.05 | OrthoFinder output from all 47 species | |
| AT1G75520 | SRS5 | SHI-related sequence 5 | 0.09 | OrthoFinder output from all 47 species | |
| AT2G18120 | SRS4 | SHI-related sequence 4 | 0.06 | OrthoFinder output from all 47 species | |
| AT2G21400 | SRS3 | SHI-related sequence3 | 0.05 | OrthoFinder output from all 47 species | |
| AT3G51060 | SRS1, STY1 | Lateral root primordium (LRP) protein-related | 0.07 | OrthoFinder output from all 47 species | |
| AT4G36260 | SRS2, STY2 | Lateral root primordium (LRP) protein-related | 0.04 | OrthoFinder output from all 47 species | |
| AT5G12330 | LRP1 | Lateral root primordium (LRP) protein-related | 0.07 | OrthoFinder output from all 47 species | |
| AT5G66350 | SHI | Lateral root primordium (LRP) protein-related | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g045239 | SRS7 | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g045684 | SHI | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g061023 | SHI | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g069569 | LRP1 | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g077130 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g079599 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g079607 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g085909 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g106034 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g09484 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.25G035200.1 | SRS1, STY1,... | SRS-type transcription factor & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.32G058400.1 | SRS1, STY1,... | SRS-type transcription factor & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g40676 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g30563 | SHI | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g13274 | SHI | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009812001 | SRS5 | RNA biosynthesis.transcriptional activation.SRS... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01024206001 | SHI | RNA biosynthesis.transcriptional activation.SRS... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os05g32070.1 | LRP1, LOC_Os05g32070 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g49830.1 | SRS1, STY1,... | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g36160.1 | SRS1, STY1,... | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
| MA_2299g0010 | LRP1 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
| MA_53545g0010 | SRS1, STY1 | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g19370 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g48067 | LRP1 | SRS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g14706 | SHI | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g16685 | SHI | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g59296 | SHI | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0017.g007215 | SHI | SRS-type transcription factor & original description: CDS=1-2160 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0051.g013968 | SHI | SRS-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g054070.1.1 | SRS5, Solyc10g054070 | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e004006_P001 | SHI, Zm00001e004006 | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e010227_P001 | SRS1, STY1,... | transcription factor (SRS) | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e013256_P002 | SHI, Zm00001e013256 | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e024681_P001 | SHI, Zm00001e024681 | transcription factor (SRS) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e026854_P001 | SHI, Zm00001e026854 | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e028304_P001 | LRP1, Zm00001e028304 | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030189_P001 | SHI, Zm00001e030189 | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e031567_P001 | LRP1, Zm00001e031567 | transcription factor (SRS) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e034798_P001 | SRS1, STY1,... | transcription factor (SRS) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| BP | GO:0006631 | fatty acid metabolic process | IEP | HCCA |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016209 | antioxidant activity | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |