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  5. LOC_Os01g72100.1

LOC_Os01g72100.1 (LOC_Os01g72100)


Aliases : LOC_Os01g72100

Description : Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica (sp|q8rzb5|cml10_orysj : 281.0)


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g72100.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00172050 CML39, CML37,... Probable calcium-binding protein CML10 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
AT1G18210 No alias Calcium-binding EF-hand family protein 0.03 OrthoFinder output from all 47 species
AT1G66400 CML23 calmodulin like 23 0.03 OrthoFinder output from all 47 species
AT2G41410 No alias Calcium-binding EF-hand family protein 0.03 OrthoFinder output from all 47 species
AT3G03430 No alias Calcium-binding EF-hand family protein 0.03 OrthoFinder output from all 47 species
AT5G37770 TCH2, CML24 EF hand calcium-binding protein family 0.06 OrthoFinder output from all 47 species
Adi_g057946 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02825 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g35874 No alias calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g43414 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43415 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13968 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12792 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33679 TCH2, CML24 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g34152 UNE14 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g00912 No alias calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g00581 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07767.t1 Aspi01Gene07767 calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene07768.t1 Aspi01Gene07768 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14419.t1 TCH2, CML24,... calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40089.t1 Aspi01Gene40089 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40092.t2 Aspi01Gene40092 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene67143.t1 Aspi01Gene67143 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67147.t1 Aspi01Gene67147 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04492 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37370 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G032100.1 Ceric.23G032100 calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G073700.1 CAM3, acam-3,... not classified & original description: pacid=50597651... 0.03 OrthoFinder output from all 47 species
Ceric.33G026800.1 Ceric.33G026800 calcium sensor *(CML) & original description:... 0.07 OrthoFinder output from all 47 species
Dac_g10925 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39853 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00276 No alias calcium sensor *(CML) & original description: none 0.14 OrthoFinder output from all 47 species
Dcu_g03528 No alias calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g03800 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05024 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10743 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11523 TCH3, ATCAL4 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19027 No alias calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g21209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27059 TCH2, CML24 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g30390 TCH2, CML24 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_35180 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species
LOC_Os11g04560.1 LOC_Os11g04560 Probable calcium-binding protein CML36 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Len_g16905 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47228 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22348 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30167 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Mp5g15820.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Msp_g20815 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08155 No alias calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g04785 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01910 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g21746 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33634 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c13_2420V3.1 Pp3c13_2420 EF hand calcium-binding protein family 0.01 OrthoFinder output from all 47 species
Solyc02g063340.1.1 Solyc02g063340 Polcalcin Nic t 2 OS=Nicotiana tabacum... 0.05 OrthoFinder output from all 47 species
Solyc02g091500.1.1 Solyc02g091500 Calcium-binding protein CML24 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g118810.1.1 Solyc03g118810 Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.04 OrthoFinder output from all 47 species
Solyc04g018110.1.1 Solyc04g018110 Probable calcium-binding protein CML35 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Solyc06g068960.1.1 Solyc06g068960 Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.05 OrthoFinder output from all 47 species
Solyc10g079755.1.1 Solyc10g079755 Probable calcium-binding protein CML36 OS=Arabidopsis... 0.12 OrthoFinder output from all 47 species
Spa_g09952 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10112 No alias calcium sensor *(CML) & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g27602 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28931 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016987_P001 Zm00001e016987 Probable calcium-binding protein CML16 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Zm00001e018643_P001 Zm00001e018643 Probable calcium-binding protein CML10 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
Zm00001e026863_P001 Zm00001e026863 Probable calcium-binding protein CML10 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 112 175
IPR002048 EF_hand_dom 38 99
No external refs found!